Experiment: M9 with calcium pantothenate 10 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF582 and GFF583 are separated by 156 nucleotides GFF583 and GFF584 are separated by 4 nucleotides
GFF582 - Two-component system sensor histidine kinase, at 629,207 to 630,754
GFF582
GFF583 - Tripartite tricarboxylate transporter TctB family, at 630,911 to 631,435
GFF583
GFF584 - Tripartite tricarboxylate transporter TctA family, at 631,440 to 633,014
GFF584
Position (kb) 630
631
632 Strain fitness (log2 ratio) -2
-1
0
1
2 at 630.278 kb on + strand, within GFF582 at 630.278 kb on + strand, within GFF582 at 630.278 kb on + strand, within GFF582 at 630.278 kb on + strand, within GFF582 at 630.278 kb on + strand, within GFF582 at 630.278 kb on + strand, within GFF582 at 630.279 kb on - strand, within GFF582 at 630.279 kb on - strand, within GFF582 at 630.449 kb on + strand, within GFF582 at 630.449 kb on + strand, within GFF582 at 630.449 kb on + strand, within GFF582 at 630.449 kb on + strand, within GFF582 at 630.450 kb on - strand, within GFF582 at 630.450 kb on - strand, within GFF582 at 630.450 kb on - strand, within GFF582 at 630.450 kb on - strand, within GFF582 at 630.780 kb on - strand at 630.794 kb on + strand at 630.795 kb on - strand at 630.802 kb on + strand at 630.802 kb on + strand at 630.802 kb on + strand at 630.802 kb on + strand at 630.810 kb on + strand at 630.810 kb on + strand at 630.810 kb on + strand at 630.810 kb on + strand at 630.811 kb on - strand at 630.811 kb on - strand at 630.811 kb on - strand at 630.811 kb on - strand at 630.811 kb on - strand at 630.811 kb on - strand at 630.811 kb on - strand at 630.811 kb on - strand at 630.811 kb on - strand at 630.811 kb on - strand at 630.811 kb on - strand at 630.811 kb on - strand at 630.816 kb on + strand at 630.816 kb on + strand at 630.878 kb on + strand at 630.910 kb on + strand at 630.910 kb on + strand at 630.910 kb on + strand at 630.910 kb on + strand at 630.910 kb on + strand at 630.910 kb on + strand at 630.910 kb on + strand at 630.910 kb on + strand at 630.910 kb on + strand at 630.910 kb on + strand at 630.910 kb on + strand at 630.910 kb on + strand at 630.910 kb on + strand at 630.910 kb on + strand at 630.910 kb on + strand at 630.911 kb on - strand at 630.911 kb on - strand at 630.911 kb on - strand at 630.911 kb on - strand at 630.911 kb on - strand at 630.911 kb on - strand at 630.911 kb on - strand at 630.911 kb on - strand at 630.911 kb on - strand at 630.911 kb on - strand at 630.911 kb on - strand at 630.911 kb on - strand at 630.911 kb on - strand at 630.911 kb on - strand at 630.911 kb on - strand at 630.911 kb on - strand at 630.911 kb on - strand at 630.983 kb on + strand, within GFF583 at 630.983 kb on + strand, within GFF583 at 630.984 kb on - strand, within GFF583 at 631.025 kb on + strand, within GFF583 at 631.025 kb on + strand, within GFF583 at 631.025 kb on + strand, within GFF583 at 631.025 kb on + strand, within GFF583 at 631.025 kb on + strand, within GFF583 at 631.026 kb on - strand, within GFF583 at 631.026 kb on - strand, within GFF583 at 631.026 kb on - strand, within GFF583 at 631.456 kb on + strand at 631.456 kb on + strand at 631.457 kb on - strand at 631.457 kb on - strand at 631.583 kb on + strand at 631.583 kb on + strand at 631.583 kb on + strand at 631.584 kb on - strand at 631.584 kb on - strand at 631.602 kb on + strand, within GFF584 at 631.602 kb on + strand, within GFF584 at 631.602 kb on + strand, within GFF584 at 631.602 kb on + strand, within GFF584 at 631.602 kb on + strand, within GFF584 at 631.602 kb on + strand, within GFF584 at 631.603 kb on - strand, within GFF584 at 631.603 kb on - strand, within GFF584 at 631.650 kb on + strand, within GFF584 at 631.650 kb on + strand, within GFF584 at 631.651 kb on - strand, within GFF584 at 631.651 kb on - strand, within GFF584 at 631.651 kb on - strand, within GFF584 at 631.663 kb on - strand, within GFF584 at 632.283 kb on + strand, within GFF584 at 632.284 kb on - strand, within GFF584 at 632.284 kb on - strand, within GFF584
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with calcium pantothenate 10 mg/mL remove 630,278 + GFF582 0.69 -0.1 630,278 + GFF582 0.69 -0.2 630,278 + GFF582 0.69 +0.0 630,278 + GFF582 0.69 +0.7 630,278 + GFF582 0.69 +0.4 630,278 + GFF582 0.69 -1.5 630,279 - GFF582 0.69 -0.0 630,279 - GFF582 0.69 -0.8 630,449 + GFF582 0.80 -0.6 630,449 + GFF582 0.80 -1.7 630,449 + GFF582 0.80 -0.1 630,449 + GFF582 0.80 -0.7 630,450 - GFF582 0.80 +0.5 630,450 - GFF582 0.80 +1.9 630,450 - GFF582 0.80 +0.9 630,450 - GFF582 0.80 +0.8 630,780 - -0.8 630,794 + -0.9 630,795 - +0.8 630,802 + -1.1 630,802 + +0.2 630,802 + +0.5 630,802 + +0.2 630,810 + -0.3 630,810 + +0.5 630,810 + -0.4 630,810 + -0.0 630,811 - -0.6 630,811 - +0.6 630,811 - +1.0 630,811 - +0.4 630,811 - +0.0 630,811 - -1.0 630,811 - +0.0 630,811 - +0.4 630,811 - +0.3 630,811 - -0.9 630,811 - +0.9 630,811 - -0.4 630,816 + -1.1 630,816 + -0.4 630,878 + -1.0 630,910 + +1.1 630,910 + -0.7 630,910 + -0.6 630,910 + +0.1 630,910 + -0.4 630,910 + +0.8 630,910 + -0.9 630,910 + +1.1 630,910 + -0.3 630,910 + -0.1 630,910 + -1.4 630,910 + +0.2 630,910 + -0.5 630,910 + -0.2 630,910 + -0.1 630,911 - -0.3 630,911 - -0.6 630,911 - +0.3 630,911 - +0.6 630,911 - -0.6 630,911 - -2.5 630,911 - -0.6 630,911 - -0.6 630,911 - +0.0 630,911 - +0.8 630,911 - +0.2 630,911 - -0.2 630,911 - -0.1 630,911 - -0.8 630,911 - +0.2 630,911 - -0.3 630,911 - +1.4 630,983 + GFF583 0.14 +0.6 630,983 + GFF583 0.14 +0.1 630,984 - GFF583 0.14 -0.7 631,025 + GFF583 0.22 -0.4 631,025 + GFF583 0.22 -1.6 631,025 + GFF583 0.22 +0.6 631,025 + GFF583 0.22 -0.4 631,025 + GFF583 0.22 +0.2 631,026 - GFF583 0.22 -0.1 631,026 - GFF583 0.22 -0.1 631,026 - GFF583 0.22 +1.5 631,456 + -1.1 631,456 + +1.4 631,457 - -0.3 631,457 - -0.8 631,583 + +0.4 631,583 + +0.6 631,583 + -0.1 631,584 - -0.5 631,584 - -0.4 631,602 + GFF584 0.10 -0.6 631,602 + GFF584 0.10 -0.1 631,602 + GFF584 0.10 +1.2 631,602 + GFF584 0.10 -0.4 631,602 + GFF584 0.10 -0.7 631,602 + GFF584 0.10 +0.7 631,603 - GFF584 0.10 +0.2 631,603 - GFF584 0.10 +0.1 631,650 + GFF584 0.13 -1.9 631,650 + GFF584 0.13 -0.1 631,651 - GFF584 0.13 +0.3 631,651 - GFF584 0.13 +0.1 631,651 - GFF584 0.13 +0.5 631,663 - GFF584 0.14 -1.9 632,283 + GFF584 0.54 -0.5 632,284 - GFF584 0.54 +0.2 632,284 - GFF584 0.54 -0.3
Or see this region's nucleotide sequence