Experiment: M9 with calcium pantothenate 10 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF5354 and GFF5355 are separated by 60 nucleotides GFF5355 and GFF5356 are separated by 7 nucleotides GFF5356 and GFF5357 are separated by 19 nucleotides GFF5357 and GFF5358 are separated by 37 nucleotides
GFF5354 - C4-dicarboxylate transport protein, at 231,264 to 232,571
GFF5354
GFF5355 - no description, at 232,632 to 232,772
GFF5355
GFF5356 - Aldose 1-epimerase, at 232,780 to 233,538
GFF5356
GFF5357 - Imidazole glycerol phosphate synthase cyclase subunit, at 233,558 to 234,337
GFF5357
GFF5358 - Phosphoribosyl-AMP cyclohydrolase (EC 3.5.4.19), at 234,375 to 234,764
GFF5358
Position (kb) 232
233
234 Strain fitness (log2 ratio) -2
-1
0
1
2
3
4 at 231.880 kb on + strand, within GFF5354 at 231.880 kb on + strand, within GFF5354 at 231.880 kb on + strand, within GFF5354 at 231.880 kb on + strand, within GFF5354 at 231.880 kb on + strand, within GFF5354 at 231.881 kb on - strand, within GFF5354 at 231.881 kb on - strand, within GFF5354 at 231.881 kb on - strand, within GFF5354 at 231.881 kb on - strand, within GFF5354 at 231.881 kb on - strand, within GFF5354 at 231.988 kb on + strand, within GFF5354 at 231.989 kb on - strand, within GFF5354 at 232.450 kb on + strand at 232.450 kb on + strand at 232.451 kb on - strand at 232.451 kb on - strand at 232.451 kb on - strand at 232.504 kb on + strand at 232.504 kb on + strand at 232.504 kb on + strand at 232.504 kb on + strand at 232.504 kb on + strand at 232.504 kb on + strand at 232.504 kb on + strand at 232.504 kb on + strand at 232.505 kb on - strand at 232.505 kb on - strand at 232.505 kb on - strand at 232.505 kb on - strand at 232.505 kb on - strand at 232.505 kb on - strand at 232.575 kb on + strand at 232.576 kb on - strand at 232.592 kb on + strand at 232.592 kb on + strand at 232.592 kb on + strand at 232.592 kb on + strand at 232.592 kb on + strand at 232.592 kb on + strand at 232.592 kb on + strand at 232.592 kb on + strand at 232.593 kb on - strand at 232.593 kb on - strand at 232.593 kb on - strand at 232.593 kb on - strand at 232.593 kb on - strand at 232.598 kb on + strand at 232.598 kb on + strand at 232.598 kb on + strand at 232.598 kb on + strand at 232.598 kb on + strand at 232.598 kb on + strand at 232.598 kb on + strand at 232.599 kb on - strand at 232.599 kb on - strand at 232.599 kb on - strand at 232.599 kb on - strand at 232.599 kb on - strand at 232.599 kb on - strand at 232.599 kb on - strand at 232.692 kb on + strand, within GFF5355 at 232.692 kb on + strand, within GFF5355 at 232.692 kb on + strand, within GFF5355 at 232.692 kb on + strand, within GFF5355 at 232.693 kb on - strand, within GFF5355 at 232.693 kb on - strand, within GFF5355 at 232.693 kb on - strand, within GFF5355 at 232.693 kb on - strand, within GFF5355 at 232.770 kb on + strand at 232.771 kb on - strand at 232.771 kb on - strand at 232.771 kb on - strand at 232.771 kb on - strand at 232.802 kb on + strand at 232.802 kb on + strand at 232.802 kb on + strand at 232.802 kb on + strand at 232.802 kb on + strand at 232.802 kb on + strand at 232.802 kb on + strand at 232.803 kb on - strand at 232.803 kb on - strand at 232.803 kb on - strand at 232.803 kb on - strand at 232.803 kb on - strand at 232.803 kb on - strand at 232.803 kb on - strand at 232.840 kb on + strand at 232.840 kb on + strand at 232.840 kb on + strand at 232.840 kb on + strand at 232.898 kb on + strand, within GFF5356 at 232.898 kb on + strand, within GFF5356 at 232.898 kb on + strand, within GFF5356 at 232.899 kb on - strand, within GFF5356 at 232.899 kb on - strand, within GFF5356 at 232.899 kb on - strand, within GFF5356 at 232.899 kb on - strand, within GFF5356 at 232.899 kb on - strand, within GFF5356 at 233.116 kb on - strand, within GFF5356 at 233.158 kb on + strand, within GFF5356 at 233.158 kb on + strand, within GFF5356 at 233.158 kb on + strand, within GFF5356 at 233.158 kb on + strand, within GFF5356 at 233.158 kb on + strand, within GFF5356 at 233.158 kb on + strand, within GFF5356 at 233.158 kb on + strand, within GFF5356 at 233.158 kb on + strand, within GFF5356 at 233.158 kb on + strand, within GFF5356 at 233.159 kb on - strand, within GFF5356 at 233.159 kb on - strand, within GFF5356 at 233.159 kb on - strand, within GFF5356 at 233.159 kb on - strand, within GFF5356 at 233.159 kb on - strand, within GFF5356 at 233.159 kb on - strand, within GFF5356 at 233.159 kb on - strand, within GFF5356 at 233.159 kb on - strand, within GFF5356 at 233.159 kb on - strand, within GFF5356 at 233.159 kb on - strand, within GFF5356 at 233.159 kb on - strand, within GFF5356 at 233.159 kb on - strand, within GFF5356 at 233.159 kb on - strand, within GFF5356 at 233.159 kb on - strand, within GFF5356 at 233.159 kb on - strand, within GFF5356 at 233.294 kb on - strand, within GFF5356 at 233.294 kb on - strand, within GFF5356 at 233.294 kb on - strand, within GFF5356 at 234.343 kb on - strand at 234.356 kb on + strand at 234.368 kb on + strand at 234.368 kb on + strand at 234.368 kb on + strand at 234.368 kb on + strand at 234.368 kb on + strand at 234.369 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with calcium pantothenate 10 mg/mL remove 231,880 + GFF5354 0.47 +0.9 231,880 + GFF5354 0.47 +0.6 231,880 + GFF5354 0.47 -0.4 231,880 + GFF5354 0.47 +0.2 231,880 + GFF5354 0.47 +1.0 231,881 - GFF5354 0.47 -0.7 231,881 - GFF5354 0.47 -1.6 231,881 - GFF5354 0.47 +0.6 231,881 - GFF5354 0.47 -0.6 231,881 - GFF5354 0.47 +2.2 231,988 + GFF5354 0.55 +1.4 231,989 - GFF5354 0.55 -1.1 232,450 + -0.3 232,450 + -0.3 232,451 - -0.7 232,451 - -0.9 232,451 - -2.3 232,504 + +0.2 232,504 + -0.5 232,504 + +0.4 232,504 + -1.4 232,504 + -0.9 232,504 + +0.2 232,504 + +0.8 232,504 + +0.8 232,505 - +0.8 232,505 - +0.7 232,505 - +0.1 232,505 - -0.6 232,505 - -0.2 232,505 - +0.2 232,575 + +2.2 232,576 - +1.2 232,592 + -0.3 232,592 + -1.4 232,592 + +1.1 232,592 + +0.8 232,592 + -0.6 232,592 + +0.1 232,592 + +0.1 232,592 + +4.4 232,593 - +0.7 232,593 - +0.2 232,593 - +0.8 232,593 - +0.1 232,593 - +0.5 232,598 + +0.0 232,598 + -0.6 232,598 + +0.2 232,598 + -1.1 232,598 + -0.5 232,598 + -0.0 232,598 + -0.8 232,599 - +0.2 232,599 - -0.9 232,599 - +0.8 232,599 - -1.3 232,599 - +0.8 232,599 - -1.1 232,599 - +0.5 232,692 + GFF5355 0.43 -2.3 232,692 + GFF5355 0.43 +0.8 232,692 + GFF5355 0.43 +0.2 232,692 + GFF5355 0.43 +0.4 232,693 - GFF5355 0.43 -0.5 232,693 - GFF5355 0.43 +0.8 232,693 - GFF5355 0.43 +1.6 232,693 - GFF5355 0.43 -0.4 232,770 + +0.2 232,771 - -0.9 232,771 - +0.4 232,771 - -0.5 232,771 - +0.1 232,802 + -0.6 232,802 + -0.6 232,802 + -0.9 232,802 + +0.2 232,802 + +0.9 232,802 + -0.2 232,802 + +0.1 232,803 - +0.8 232,803 - +0.2 232,803 - +0.2 232,803 - -0.9 232,803 - +1.8 232,803 - -1.5 232,803 - +0.0 232,840 + +0.8 232,840 + -1.6 232,840 + -1.9 232,840 + +0.2 232,898 + GFF5356 0.16 -0.5 232,898 + GFF5356 0.16 -0.3 232,898 + GFF5356 0.16 -2.7 232,899 - GFF5356 0.16 -0.2 232,899 - GFF5356 0.16 +0.4 232,899 - GFF5356 0.16 +0.2 232,899 - GFF5356 0.16 -0.3 232,899 - GFF5356 0.16 +1.0 233,116 - GFF5356 0.44 -1.0 233,158 + GFF5356 0.50 -1.5 233,158 + GFF5356 0.50 -0.6 233,158 + GFF5356 0.50 +0.5 233,158 + GFF5356 0.50 -1.3 233,158 + GFF5356 0.50 +0.5 233,158 + GFF5356 0.50 -1.5 233,158 + GFF5356 0.50 -1.2 233,158 + GFF5356 0.50 +0.0 233,158 + GFF5356 0.50 +0.1 233,159 - GFF5356 0.50 -1.8 233,159 - GFF5356 0.50 -0.6 233,159 - GFF5356 0.50 -1.3 233,159 - GFF5356 0.50 -1.0 233,159 - GFF5356 0.50 -0.5 233,159 - GFF5356 0.50 +0.1 233,159 - GFF5356 0.50 -0.6 233,159 - GFF5356 0.50 -1.2 233,159 - GFF5356 0.50 +0.5 233,159 - GFF5356 0.50 -0.8 233,159 - GFF5356 0.50 -1.0 233,159 - GFF5356 0.50 -1.3 233,159 - GFF5356 0.50 +0.3 233,159 - GFF5356 0.50 +0.5 233,159 - GFF5356 0.50 +1.0 233,294 - GFF5356 0.68 +0.8 233,294 - GFF5356 0.68 -0.3 233,294 - GFF5356 0.68 -1.7 234,343 - -0.0 234,356 + -0.3 234,368 + +0.7 234,368 + -0.2 234,368 + -0.3 234,368 + -1.2 234,368 + -0.6 234,369 - +0.0
Or see this region's nucleotide sequence