Experiment: M9 with calcium pantothenate 10 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF5283 and GFF5284 are separated by 254 nucleotides GFF5284 and GFF5285 overlap by 1 nucleotides GFF5285 and GFF5286 are separated by 122 nucleotides
GFF5283 - Heat shock protein 10 kDa family chaperone GroES, at 152,640 to 152,930
GFF5283
GFF5284 - RNA polymerase ECF-type sigma factor, at 153,185 to 153,694
GFF5284
GFF5285 - Fe2+-dicitrate sensor, membrane component, at 153,694 to 154,719
GFF5285
GFF5286 - Ferrichrome-iron receptor, at 154,842 to 157,322
GFF5286
Position (kb) 153
154
155 Strain fitness (log2 ratio) -2
-1
0
1
2 at 153.022 kb on - strand at 153.022 kb on - strand at 153.022 kb on - strand at 153.022 kb on - strand at 153.045 kb on - strand at 153.045 kb on - strand at 153.050 kb on + strand at 153.051 kb on - strand at 153.141 kb on + strand at 153.233 kb on + strand at 153.233 kb on + strand at 153.233 kb on + strand at 153.233 kb on + strand at 153.233 kb on + strand at 153.233 kb on + strand at 153.233 kb on + strand at 153.234 kb on - strand at 153.374 kb on + strand, within GFF5284 at 153.374 kb on + strand, within GFF5284 at 153.374 kb on + strand, within GFF5284 at 153.375 kb on - strand, within GFF5284 at 153.375 kb on - strand, within GFF5284 at 153.375 kb on - strand, within GFF5284 at 153.440 kb on + strand, within GFF5284 at 153.440 kb on + strand, within GFF5284 at 153.441 kb on - strand, within GFF5284 at 153.599 kb on + strand, within GFF5284 at 153.600 kb on - strand, within GFF5284 at 153.600 kb on - strand, within GFF5284 at 153.600 kb on - strand, within GFF5284 at 153.600 kb on - strand, within GFF5284 at 153.600 kb on - strand, within GFF5284 at 153.600 kb on - strand, within GFF5284 at 153.650 kb on + strand at 153.650 kb on + strand at 153.650 kb on + strand at 153.650 kb on + strand at 153.650 kb on + strand at 153.650 kb on + strand at 153.650 kb on + strand at 153.650 kb on + strand at 153.650 kb on + strand at 153.650 kb on + strand at 153.650 kb on + strand at 153.650 kb on + strand at 153.650 kb on + strand at 153.650 kb on + strand at 153.650 kb on + strand at 153.650 kb on + strand at 153.651 kb on - strand at 153.651 kb on - strand at 153.651 kb on - strand at 153.651 kb on - strand at 153.651 kb on - strand at 153.651 kb on - strand at 153.651 kb on - strand at 153.651 kb on - strand at 153.651 kb on - strand at 153.651 kb on - strand at 153.651 kb on - strand at 153.651 kb on - strand at 153.651 kb on - strand at 153.651 kb on - strand at 153.651 kb on - strand at 153.651 kb on - strand at 153.651 kb on - strand at 153.677 kb on + strand at 153.677 kb on + strand at 153.677 kb on + strand at 153.677 kb on + strand at 153.677 kb on + strand at 153.677 kb on + strand at 153.678 kb on - strand at 153.678 kb on - strand at 153.678 kb on - strand at 153.678 kb on - strand at 153.678 kb on - strand at 153.678 kb on - strand at 153.678 kb on - strand at 153.678 kb on - strand at 153.785 kb on - strand at 153.785 kb on - strand at 153.785 kb on - strand at 153.785 kb on - strand at 153.785 kb on - strand at 154.015 kb on + strand, within GFF5285 at 154.015 kb on + strand, within GFF5285 at 154.015 kb on + strand, within GFF5285 at 154.016 kb on - strand, within GFF5285 at 154.016 kb on - strand, within GFF5285 at 154.016 kb on - strand, within GFF5285 at 154.072 kb on + strand, within GFF5285 at 154.073 kb on - strand, within GFF5285 at 154.556 kb on - strand, within GFF5285 at 154.709 kb on + strand at 154.709 kb on + strand at 154.777 kb on + strand at 154.791 kb on + strand at 154.983 kb on + strand at 154.983 kb on + strand at 154.983 kb on + strand at 154.983 kb on + strand at 154.984 kb on - strand at 154.984 kb on - strand at 155.106 kb on + strand, within GFF5286 at 155.106 kb on + strand, within GFF5286 at 155.106 kb on + strand, within GFF5286 at 155.106 kb on + strand, within GFF5286 at 155.107 kb on - strand, within GFF5286 at 155.107 kb on - strand, within GFF5286 at 155.107 kb on - strand, within GFF5286 at 155.107 kb on - strand, within GFF5286 at 155.107 kb on - strand, within GFF5286 at 155.107 kb on - strand, within GFF5286 at 155.107 kb on - strand, within GFF5286 at 155.107 kb on - strand, within GFF5286 at 155.107 kb on - strand, within GFF5286 at 155.107 kb on - strand, within GFF5286 at 155.625 kb on + strand, within GFF5286 at 155.625 kb on + strand, within GFF5286 at 155.625 kb on + strand, within GFF5286 at 155.718 kb on + strand, within GFF5286 at 155.719 kb on - strand, within GFF5286
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with calcium pantothenate 10 mg/mL remove 153,022 - +0.3 153,022 - +0.0 153,022 - -1.2 153,022 - -0.9 153,045 - -0.9 153,045 - -0.8 153,050 + +0.8 153,051 - +0.6 153,141 + +0.4 153,233 + -0.6 153,233 + -0.2 153,233 + +0.2 153,233 + -0.9 153,233 + -2.1 153,233 + -0.4 153,233 + +0.8 153,234 - +0.3 153,374 + GFF5284 0.37 +0.1 153,374 + GFF5284 0.37 +2.4 153,374 + GFF5284 0.37 -0.0 153,375 - GFF5284 0.37 +0.8 153,375 - GFF5284 0.37 +0.4 153,375 - GFF5284 0.37 -1.1 153,440 + GFF5284 0.50 -2.0 153,440 + GFF5284 0.50 +0.4 153,441 - GFF5284 0.50 -1.3 153,599 + GFF5284 0.81 +0.0 153,600 - GFF5284 0.81 -1.3 153,600 - GFF5284 0.81 -0.1 153,600 - GFF5284 0.81 -0.9 153,600 - GFF5284 0.81 +0.2 153,600 - GFF5284 0.81 -0.2 153,600 - GFF5284 0.81 +0.6 153,650 + +0.1 153,650 + +0.6 153,650 + -0.8 153,650 + +0.0 153,650 + -2.1 153,650 + -0.6 153,650 + +0.2 153,650 + +0.1 153,650 + +0.5 153,650 + -0.6 153,650 + -0.0 153,650 + -0.4 153,650 + -1.0 153,650 + +1.2 153,650 + +0.1 153,650 + +0.8 153,651 - +0.3 153,651 - -0.3 153,651 - +0.1 153,651 - +0.1 153,651 - +0.0 153,651 - -1.7 153,651 - +0.1 153,651 - +0.4 153,651 - -1.4 153,651 - +0.0 153,651 - -0.9 153,651 - -0.3 153,651 - +0.1 153,651 - -1.4 153,651 - -0.4 153,651 - -0.9 153,651 - +0.2 153,677 + -1.7 153,677 + -0.9 153,677 + -1.1 153,677 + -0.8 153,677 + -1.4 153,677 + +0.1 153,678 - -0.3 153,678 - +0.8 153,678 - -0.0 153,678 - -0.6 153,678 - -0.4 153,678 - +0.2 153,678 - +0.2 153,678 - +0.0 153,785 - -0.1 153,785 - +0.2 153,785 - -1.6 153,785 - -1.6 153,785 - -0.9 154,015 + GFF5285 0.31 -0.0 154,015 + GFF5285 0.31 -0.2 154,015 + GFF5285 0.31 -0.5 154,016 - GFF5285 0.31 -1.7 154,016 - GFF5285 0.31 -0.2 154,016 - GFF5285 0.31 -0.1 154,072 + GFF5285 0.37 -0.8 154,073 - GFF5285 0.37 -1.3 154,556 - GFF5285 0.84 +0.3 154,709 + -0.8 154,709 + -0.8 154,777 + +0.0 154,791 + -1.7 154,983 + -0.9 154,983 + +0.4 154,983 + -1.5 154,983 + -0.4 154,984 - -1.5 154,984 - -0.6 155,106 + GFF5286 0.11 +0.3 155,106 + GFF5286 0.11 -0.2 155,106 + GFF5286 0.11 +0.1 155,106 + GFF5286 0.11 +0.2 155,107 - GFF5286 0.11 -0.2 155,107 - GFF5286 0.11 +0.2 155,107 - GFF5286 0.11 -1.4 155,107 - GFF5286 0.11 +0.7 155,107 - GFF5286 0.11 +0.2 155,107 - GFF5286 0.11 -0.2 155,107 - GFF5286 0.11 +0.8 155,107 - GFF5286 0.11 -0.4 155,107 - GFF5286 0.11 -0.5 155,107 - GFF5286 0.11 +0.2 155,625 + GFF5286 0.32 -0.6 155,625 + GFF5286 0.32 +0.6 155,625 + GFF5286 0.32 +0.6 155,718 + GFF5286 0.35 -0.3 155,719 - GFF5286 0.35 +0.1
Or see this region's nucleotide sequence