Experiment: M9 with calcium pantothenate 10 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF5263 and GFF5264 overlap by 4 nucleotides GFF5264 and GFF5265 are separated by 620 nucleotides
GFF5263 - Ferric iron ABC transporter, permease protein, at 128,991 to 131,264
GFF5263
GFF5264 - Spermidine/putrescine import ABC transporter ATP-binding protein PotA (TC 3.A.1.11.1), at 131,261 to 132,310
GFF5264
GFF5265 - Outer membrane lipoprotein, at 132,931 to 133,599
GFF5265
Position (kb) 131
132
133 Strain fitness (log2 ratio) -2
-1
0
1
2 at 130.350 kb on + strand, within GFF5263 at 130.351 kb on - strand, within GFF5263 at 130.422 kb on + strand, within GFF5263 at 130.422 kb on + strand, within GFF5263 at 130.422 kb on + strand, within GFF5263 at 130.422 kb on + strand, within GFF5263 at 130.422 kb on + strand, within GFF5263 at 130.422 kb on + strand, within GFF5263 at 130.422 kb on + strand, within GFF5263 at 130.423 kb on - strand, within GFF5263 at 130.423 kb on - strand, within GFF5263 at 130.423 kb on - strand, within GFF5263 at 130.423 kb on - strand, within GFF5263 at 130.423 kb on - strand, within GFF5263 at 130.423 kb on - strand, within GFF5263 at 130.423 kb on - strand, within GFF5263 at 130.423 kb on - strand, within GFF5263 at 130.423 kb on - strand, within GFF5263 at 130.464 kb on + strand, within GFF5263 at 130.464 kb on + strand, within GFF5263 at 130.465 kb on - strand, within GFF5263 at 130.512 kb on + strand, within GFF5263 at 130.513 kb on - strand, within GFF5263 at 130.513 kb on - strand, within GFF5263 at 130.513 kb on - strand, within GFF5263 at 130.767 kb on + strand, within GFF5263 at 130.767 kb on + strand, within GFF5263 at 130.767 kb on + strand, within GFF5263 at 130.768 kb on - strand, within GFF5263 at 130.768 kb on - strand, within GFF5263 at 130.768 kb on - strand, within GFF5263 at 130.768 kb on - strand, within GFF5263 at 130.768 kb on - strand, within GFF5263 at 130.768 kb on - strand, within GFF5263 at 130.768 kb on - strand, within GFF5263 at 130.768 kb on - strand, within GFF5263 at 131.001 kb on + strand, within GFF5263 at 131.002 kb on - strand, within GFF5263 at 131.002 kb on - strand, within GFF5263 at 131.079 kb on + strand at 131.079 kb on + strand at 131.079 kb on + strand at 131.079 kb on + strand at 131.079 kb on + strand at 131.079 kb on + strand at 131.079 kb on + strand at 131.079 kb on + strand at 131.079 kb on + strand at 131.079 kb on + strand at 131.079 kb on + strand at 131.080 kb on - strand at 131.080 kb on - strand at 131.080 kb on - strand at 131.080 kb on - strand at 131.080 kb on - strand at 131.080 kb on - strand at 131.080 kb on - strand at 131.080 kb on - strand at 131.080 kb on - strand at 131.080 kb on - strand at 131.109 kb on + strand at 131.127 kb on + strand at 131.127 kb on + strand at 131.284 kb on + strand at 131.285 kb on - strand at 131.285 kb on - strand at 131.285 kb on - strand at 131.522 kb on + strand, within GFF5264 at 131.522 kb on + strand, within GFF5264 at 131.522 kb on + strand, within GFF5264 at 131.522 kb on + strand, within GFF5264 at 131.522 kb on + strand, within GFF5264 at 131.522 kb on + strand, within GFF5264 at 131.522 kb on + strand, within GFF5264 at 131.522 kb on + strand, within GFF5264 at 131.522 kb on + strand, within GFF5264 at 131.522 kb on + strand, within GFF5264 at 131.522 kb on + strand, within GFF5264 at 131.522 kb on + strand, within GFF5264 at 131.522 kb on + strand, within GFF5264 at 131.523 kb on - strand, within GFF5264 at 131.523 kb on - strand, within GFF5264 at 131.523 kb on - strand, within GFF5264 at 131.523 kb on - strand, within GFF5264 at 131.523 kb on - strand, within GFF5264 at 131.565 kb on - strand, within GFF5264 at 131.837 kb on + strand, within GFF5264 at 131.837 kb on + strand, within GFF5264 at 131.837 kb on + strand, within GFF5264 at 131.838 kb on - strand, within GFF5264 at 131.838 kb on - strand, within GFF5264 at 131.838 kb on - strand, within GFF5264 at 131.936 kb on + strand, within GFF5264 at 131.936 kb on + strand, within GFF5264 at 131.936 kb on + strand, within GFF5264 at 131.936 kb on + strand, within GFF5264 at 131.936 kb on + strand, within GFF5264 at 131.936 kb on + strand, within GFF5264 at 131.936 kb on + strand, within GFF5264 at 131.936 kb on + strand, within GFF5264 at 131.937 kb on - strand, within GFF5264 at 131.937 kb on - strand, within GFF5264 at 131.937 kb on - strand, within GFF5264 at 132.161 kb on + strand, within GFF5264 at 132.162 kb on - strand, within GFF5264 at 132.176 kb on + strand, within GFF5264 at 132.177 kb on - strand, within GFF5264 at 132.182 kb on + strand, within GFF5264 at 132.182 kb on + strand, within GFF5264 at 132.183 kb on - strand, within GFF5264 at 132.183 kb on - strand, within GFF5264 at 132.183 kb on - strand, within GFF5264 at 132.183 kb on - strand, within GFF5264 at 132.381 kb on + strand at 132.656 kb on + strand at 132.656 kb on + strand at 132.656 kb on + strand at 132.656 kb on + strand at 132.656 kb on + strand at 132.656 kb on + strand at 132.656 kb on + strand at 132.657 kb on - strand at 132.657 kb on - strand at 132.659 kb on + strand at 132.659 kb on + strand at 132.659 kb on + strand at 132.659 kb on + strand at 132.659 kb on + strand at 132.659 kb on + strand at 132.659 kb on + strand at 132.659 kb on + strand at 132.660 kb on - strand at 132.660 kb on - strand at 132.660 kb on - strand at 132.660 kb on - strand at 132.660 kb on - strand at 132.660 kb on - strand at 132.660 kb on - strand at 132.660 kb on - strand at 132.782 kb on + strand at 132.782 kb on + strand at 132.782 kb on + strand at 132.782 kb on + strand at 132.782 kb on + strand at 132.782 kb on + strand at 132.782 kb on + strand at 132.783 kb on - strand at 132.783 kb on - strand at 132.783 kb on - strand at 132.932 kb on + strand at 132.946 kb on + strand at 132.947 kb on - strand at 132.947 kb on - strand at 132.947 kb on - strand at 132.947 kb on - strand at 132.947 kb on - strand at 132.947 kb on - strand at 132.947 kb on - strand at 132.984 kb on - strand at 133.082 kb on + strand, within GFF5265 at 133.082 kb on + strand, within GFF5265 at 133.109 kb on + strand, within GFF5265 at 133.109 kb on + strand, within GFF5265 at 133.109 kb on + strand, within GFF5265 at 133.292 kb on + strand, within GFF5265 at 133.293 kb on - strand, within GFF5265 at 133.293 kb on - strand, within GFF5265 at 133.293 kb on - strand, within GFF5265
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with calcium pantothenate 10 mg/mL remove 130,350 + GFF5263 0.60 +0.9 130,351 - GFF5263 0.60 -0.9 130,422 + GFF5263 0.63 +0.4 130,422 + GFF5263 0.63 -0.0 130,422 + GFF5263 0.63 -0.1 130,422 + GFF5263 0.63 +0.7 130,422 + GFF5263 0.63 -1.2 130,422 + GFF5263 0.63 +0.8 130,422 + GFF5263 0.63 -1.1 130,423 - GFF5263 0.63 -0.5 130,423 - GFF5263 0.63 +0.2 130,423 - GFF5263 0.63 +0.8 130,423 - GFF5263 0.63 -0.2 130,423 - GFF5263 0.63 +1.5 130,423 - GFF5263 0.63 -1.2 130,423 - GFF5263 0.63 -1.7 130,423 - GFF5263 0.63 -0.8 130,423 - GFF5263 0.63 +0.8 130,464 + GFF5263 0.65 +0.8 130,464 + GFF5263 0.65 +0.4 130,465 - GFF5263 0.65 +0.2 130,512 + GFF5263 0.67 -1.0 130,513 - GFF5263 0.67 -0.1 130,513 - GFF5263 0.67 +0.6 130,513 - GFF5263 0.67 -0.2 130,767 + GFF5263 0.78 +0.3 130,767 + GFF5263 0.78 +0.2 130,767 + GFF5263 0.78 -1.4 130,768 - GFF5263 0.78 +0.3 130,768 - GFF5263 0.78 +0.1 130,768 - GFF5263 0.78 +0.2 130,768 - GFF5263 0.78 +0.4 130,768 - GFF5263 0.78 +0.5 130,768 - GFF5263 0.78 -0.6 130,768 - GFF5263 0.78 -0.9 130,768 - GFF5263 0.78 +0.0 131,001 + GFF5263 0.88 +0.3 131,002 - GFF5263 0.88 +0.3 131,002 - GFF5263 0.88 -0.5 131,079 + +0.0 131,079 + +0.8 131,079 + +0.1 131,079 + -0.0 131,079 + +0.3 131,079 + -0.3 131,079 + +0.0 131,079 + +0.2 131,079 + +0.7 131,079 + +1.8 131,079 + +1.1 131,080 - -0.2 131,080 - +0.2 131,080 - +1.8 131,080 - -0.6 131,080 - +0.2 131,080 - -0.1 131,080 - -0.6 131,080 - -0.9 131,080 - +0.8 131,080 - +0.4 131,109 + -1.5 131,127 + +0.4 131,127 + +0.3 131,284 + +0.2 131,285 - -0.0 131,285 - +0.3 131,285 - -0.7 131,522 + GFF5264 0.25 -0.3 131,522 + GFF5264 0.25 +0.7 131,522 + GFF5264 0.25 -0.6 131,522 + GFF5264 0.25 +0.3 131,522 + GFF5264 0.25 +1.2 131,522 + GFF5264 0.25 +1.1 131,522 + GFF5264 0.25 +1.0 131,522 + GFF5264 0.25 -0.5 131,522 + GFF5264 0.25 -0.1 131,522 + GFF5264 0.25 -0.4 131,522 + GFF5264 0.25 +0.1 131,522 + GFF5264 0.25 +0.7 131,522 + GFF5264 0.25 +0.8 131,523 - GFF5264 0.25 +0.7 131,523 - GFF5264 0.25 -0.2 131,523 - GFF5264 0.25 -0.8 131,523 - GFF5264 0.25 -0.1 131,523 - GFF5264 0.25 +0.7 131,565 - GFF5264 0.29 -2.4 131,837 + GFF5264 0.55 -0.1 131,837 + GFF5264 0.55 -0.5 131,837 + GFF5264 0.55 +0.0 131,838 - GFF5264 0.55 +0.2 131,838 - GFF5264 0.55 -0.2 131,838 - GFF5264 0.55 +1.0 131,936 + GFF5264 0.64 +0.6 131,936 + GFF5264 0.64 +0.1 131,936 + GFF5264 0.64 -0.2 131,936 + GFF5264 0.64 -0.3 131,936 + GFF5264 0.64 +0.1 131,936 + GFF5264 0.64 -0.2 131,936 + GFF5264 0.64 -0.5 131,936 + GFF5264 0.64 +0.2 131,937 - GFF5264 0.64 +0.8 131,937 - GFF5264 0.64 +0.8 131,937 - GFF5264 0.64 +0.2 132,161 + GFF5264 0.86 -0.6 132,162 - GFF5264 0.86 -1.2 132,176 + GFF5264 0.87 -0.3 132,177 - GFF5264 0.87 -0.8 132,182 + GFF5264 0.88 +0.4 132,182 + GFF5264 0.88 -0.8 132,183 - GFF5264 0.88 +0.2 132,183 - GFF5264 0.88 +1.5 132,183 - GFF5264 0.88 +0.5 132,183 - GFF5264 0.88 +0.3 132,381 + +0.6 132,656 + -0.1 132,656 + -0.2 132,656 + -0.5 132,656 + -0.3 132,656 + +0.8 132,656 + +0.1 132,656 + -0.8 132,657 - +0.7 132,657 - +0.7 132,659 + -0.5 132,659 + -0.2 132,659 + -0.8 132,659 + +1.1 132,659 + +0.3 132,659 + +0.8 132,659 + -0.4 132,659 + +0.6 132,660 - -1.0 132,660 - +1.1 132,660 - -0.9 132,660 - -1.2 132,660 - +0.9 132,660 - +0.2 132,660 - -1.2 132,660 - +0.4 132,782 + +0.2 132,782 + -0.1 132,782 + -0.4 132,782 + +0.7 132,782 + +0.4 132,782 + +0.3 132,782 + -0.5 132,783 - -1.2 132,783 - -0.2 132,783 - +0.0 132,932 + +0.2 132,946 + -2.4 132,947 - -0.0 132,947 - +1.5 132,947 - +0.3 132,947 - +0.9 132,947 - -1.0 132,947 - +1.8 132,947 - +1.2 132,984 - +0.4 133,082 + GFF5265 0.23 -0.8 133,082 + GFF5265 0.23 +0.1 133,109 + GFF5265 0.27 -0.3 133,109 + GFF5265 0.27 +0.0 133,109 + GFF5265 0.27 +0.0 133,292 + GFF5265 0.54 +0.3 133,293 - GFF5265 0.54 +0.6 133,293 - GFF5265 0.54 -0.3 133,293 - GFF5265 0.54 +0.5
Or see this region's nucleotide sequence