Experiment: M9 with calcium pantothenate 10 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF4583 and GFF4584 are separated by 94 nucleotides GFF4584 and GFF4585 are separated by 30 nucleotides
GFF4583 - TRAP-type C4-dicarboxylate transport system, large permease component, at 224,095 to 225,393
GFF4583
GFF4584 - TRAP-type transport system, periplasmic component, predicted N-acetylneuraminate-binding protein, at 225,488 to 226,525
GFF4584
GFF4585 - hypothetical protein, at 226,556 to 227,521
GFF4585
Position (kb) 225
226
227 Strain fitness (log2 ratio) -2
-1
0
1 at 224.852 kb on - strand, within GFF4583 at 224.852 kb on - strand, within GFF4583 at 224.852 kb on - strand, within GFF4583 at 224.852 kb on - strand, within GFF4583 at 224.981 kb on - strand, within GFF4583 at 225.049 kb on + strand, within GFF4583 at 225.157 kb on + strand, within GFF4583 at 225.157 kb on + strand, within GFF4583 at 225.157 kb on + strand, within GFF4583 at 225.158 kb on - strand, within GFF4583 at 225.160 kb on + strand, within GFF4583 at 225.160 kb on + strand, within GFF4583 at 225.160 kb on + strand, within GFF4583 at 225.160 kb on + strand, within GFF4583 at 225.161 kb on - strand, within GFF4583 at 225.161 kb on - strand, within GFF4583 at 225.161 kb on - strand, within GFF4583 at 225.161 kb on - strand, within GFF4583 at 225.161 kb on - strand, within GFF4583 at 225.161 kb on - strand, within GFF4583 at 225.388 kb on + strand at 225.458 kb on + strand at 225.459 kb on - strand at 225.474 kb on + strand at 225.474 kb on + strand at 225.587 kb on + strand at 225.587 kb on + strand at 225.588 kb on - strand at 225.588 kb on - strand at 225.849 kb on - strand, within GFF4584 at 226.205 kb on + strand, within GFF4584 at 226.206 kb on - strand, within GFF4584 at 226.448 kb on + strand at 226.523 kb on + strand at 227.100 kb on + strand, within GFF4585 at 227.100 kb on + strand, within GFF4585 at 227.101 kb on - strand, within GFF4585 at 227.325 kb on - strand, within GFF4585
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with calcium pantothenate 10 mg/mL remove 224,852 - GFF4583 0.58 -0.8 224,852 - GFF4583 0.58 -0.6 224,852 - GFF4583 0.58 +0.3 224,852 - GFF4583 0.58 -0.4 224,981 - GFF4583 0.68 +0.5 225,049 + GFF4583 0.73 -0.6 225,157 + GFF4583 0.82 +1.5 225,157 + GFF4583 0.82 -0.6 225,157 + GFF4583 0.82 +0.9 225,158 - GFF4583 0.82 +0.5 225,160 + GFF4583 0.82 +0.6 225,160 + GFF4583 0.82 -0.2 225,160 + GFF4583 0.82 +0.2 225,160 + GFF4583 0.82 +0.8 225,161 - GFF4583 0.82 -0.0 225,161 - GFF4583 0.82 -0.4 225,161 - GFF4583 0.82 -0.4 225,161 - GFF4583 0.82 +0.1 225,161 - GFF4583 0.82 +0.7 225,161 - GFF4583 0.82 -0.4 225,388 + +1.3 225,458 + -0.0 225,459 - -1.3 225,474 + -0.1 225,474 + +0.4 225,587 + -1.9 225,587 + +0.5 225,588 - -0.7 225,588 - +0.9 225,849 - GFF4584 0.35 +0.9 226,205 + GFF4584 0.69 +0.5 226,206 - GFF4584 0.69 +0.7 226,448 + -0.3 226,523 + -0.6 227,100 + GFF4585 0.56 -0.4 227,100 + GFF4585 0.56 +0.2 227,101 - GFF4585 0.56 -0.6 227,325 - GFF4585 0.80 +1.0
Or see this region's nucleotide sequence