Strain Fitness in Variovorax sp. SCN45 around GFF4369

Experiment: M9 with calcium pantothenate 10 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9 with calcium pantothenate 10 mg/mL
292,702	+		GFF4368	0.70	+0.5
292,771	+		GFF4368	0.74	-0.3
293,047	+		GFF4368	0.88	+2.4
293,048	-		GFF4368	0.88	-0.6
293,056	+		GFF4368	0.88	-0.2
293,328	+				-0.3
293,451	+		GFF4369	0.41	+0.4
293,476	+		GFF4369	0.51	-1.4
293,476	+		GFF4369	0.51	-0.3
293,477	-		GFF4369	0.51	+0.2
293,505	-		GFF4369	0.62	+0.7
293,505	-		GFF4369	0.62	+0.7
293,515	+		GFF4369	0.66	+0.2
293,516	-		GFF4369	0.67	+0.4
293,705	-				-1.2
293,793	-				+0.2
293,996	+		GFF4370	0.12	+0.3
293,996	+		GFF4370	0.12	+1.4
293,996	-		GFF4370	0.12	-0.1
293,997	-		GFF4370	0.12	-0.3
294,489	-		GFF4370	0.33	-1.4
294,518	+		GFF4370	0.34	+1.5