Experiment: M9 with calcium pantothenate 10 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF4358 and GFF4359 are separated by 180 nucleotides GFF4359 and GFF4360 are separated by 7 nucleotides GFF4360 and GFF4361 are separated by 99 nucleotides GFF4361 and GFF4362 are separated by 14 nucleotides
GFF4358 - Oxidoreductase, short-chain dehydrogenase/reductase family, at 281,290 to 282,078
GFF4358
GFF4359 - no description, at 282,259 to 282,576
GFF4359
GFF4360 - no description, at 282,584 to 282,853
GFF4360
GFF4361 - Gamma-glutamyltranspeptidase (EC 2.3.2.2) @ Glutathione hydrolase (EC 3.4.19.13), at 282,953 to 284,584
GFF4361
GFF4362 - BUG/TctC family periplasmic protein, at 284,599 to 285,585
GFF4362
Position (kb) 282
283
284
285 Strain fitness (log2 ratio) -2
-1
0
1
2 at 282.123 kb on + strand at 282.135 kb on + strand at 282.557 kb on + strand at 282.558 kb on - strand at 282.558 kb on - strand at 282.558 kb on - strand at 282.660 kb on + strand, within GFF4360 at 282.661 kb on - strand, within GFF4360 at 283.034 kb on + strand at 283.034 kb on + strand at 283.066 kb on - strand at 283.066 kb on - strand at 283.071 kb on + strand at 283.327 kb on + strand, within GFF4361 at 283.327 kb on + strand, within GFF4361 at 283.401 kb on + strand, within GFF4361 at 283.401 kb on + strand, within GFF4361 at 283.402 kb on - strand, within GFF4361 at 284.041 kb on - strand, within GFF4361 at 284.064 kb on + strand, within GFF4361 at 284.146 kb on - strand, within GFF4361 at 284.386 kb on - strand, within GFF4361 at 284.413 kb on - strand, within GFF4361 at 284.955 kb on - strand, within GFF4362 at 285.021 kb on - strand, within GFF4362 at 285.021 kb on - strand, within GFF4362 at 285.088 kb on - strand, within GFF4362 at 285.261 kb on - strand, within GFF4362 at 285.312 kb on - strand, within GFF4362 at 285.466 kb on + strand, within GFF4362 at 285.510 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with calcium pantothenate 10 mg/mL remove 282,123 + -0.1 282,135 + -0.3 282,557 + -0.9 282,558 - +0.4 282,558 - -0.3 282,558 - -0.5 282,660 + GFF4360 0.28 +1.5 282,661 - GFF4360 0.29 -0.3 283,034 + -0.1 283,034 + -0.2 283,066 - -1.0 283,066 - +2.5 283,071 + -1.1 283,327 + GFF4361 0.23 +0.7 283,327 + GFF4361 0.23 +0.7 283,401 + GFF4361 0.27 +0.4 283,401 + GFF4361 0.27 +0.4 283,402 - GFF4361 0.28 -0.5 284,041 - GFF4361 0.67 -0.5 284,064 + GFF4361 0.68 -0.8 284,146 - GFF4361 0.73 -0.4 284,386 - GFF4361 0.88 -0.1 284,413 - GFF4361 0.89 +0.8 284,955 - GFF4362 0.36 +0.7 285,021 - GFF4362 0.43 +0.6 285,021 - GFF4362 0.43 +0.1 285,088 - GFF4362 0.50 +0.6 285,261 - GFF4362 0.67 +1.9 285,312 - GFF4362 0.72 -1.4 285,466 + GFF4362 0.88 -1.9 285,510 - +0.2
Or see this region's nucleotide sequence