Experiment: M9 with calcium pantothenate 10 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF4239 and GFF4240 are separated by 188 nucleotides GFF4240 and GFF4241 overlap by 1 nucleotides
GFF4239 - Mll5186 protein, at 149,991 to 150,965
GFF4239
GFF4240 - Integral membrane protein, at 151,154 to 152,875
GFF4240
GFF4241 - diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s), at 152,875 to 155,901
GFF4241
Position (kb) 151
152
153 Strain fitness (log2 ratio) -2
-1
0
1
2 at 150.163 kb on + strand, within GFF4239 at 150.163 kb on + strand, within GFF4239 at 150.163 kb on + strand, within GFF4239 at 150.163 kb on + strand, within GFF4239 at 150.163 kb on + strand, within GFF4239 at 150.164 kb on - strand, within GFF4239 at 150.164 kb on - strand, within GFF4239 at 150.164 kb on - strand, within GFF4239 at 150.164 kb on - strand, within GFF4239 at 150.164 kb on - strand, within GFF4239 at 150.430 kb on + strand, within GFF4239 at 150.430 kb on + strand, within GFF4239 at 150.430 kb on + strand, within GFF4239 at 150.430 kb on + strand, within GFF4239 at 150.431 kb on - strand, within GFF4239 at 150.431 kb on - strand, within GFF4239 at 150.431 kb on - strand, within GFF4239 at 150.650 kb on - strand, within GFF4239 at 150.650 kb on - strand, within GFF4239 at 150.944 kb on + strand at 150.944 kb on + strand at 150.945 kb on - strand at 150.955 kb on + strand at 150.955 kb on + strand at 150.955 kb on + strand at 150.956 kb on - strand at 150.980 kb on + strand at 150.980 kb on + strand at 150.980 kb on + strand at 150.981 kb on - strand at 150.981 kb on - strand at 150.981 kb on - strand at 151.372 kb on - strand, within GFF4240 at 151.486 kb on - strand, within GFF4240 at 151.530 kb on + strand, within GFF4240 at 151.531 kb on - strand, within GFF4240 at 151.675 kb on - strand, within GFF4240 at 151.932 kb on + strand, within GFF4240 at 151.932 kb on + strand, within GFF4240 at 151.932 kb on + strand, within GFF4240 at 151.932 kb on + strand, within GFF4240 at 151.933 kb on - strand, within GFF4240 at 151.933 kb on - strand, within GFF4240 at 152.442 kb on + strand, within GFF4240 at 152.443 kb on - strand, within GFF4240 at 152.478 kb on + strand, within GFF4240 at 152.479 kb on - strand, within GFF4240 at 152.523 kb on + strand, within GFF4240 at 152.524 kb on - strand, within GFF4240 at 152.524 kb on - strand, within GFF4240 at 152.524 kb on - strand, within GFF4240 at 152.524 kb on - strand, within GFF4240 at 152.602 kb on + strand, within GFF4240 at 152.634 kb on + strand, within GFF4240 at 152.634 kb on + strand, within GFF4240 at 152.634 kb on + strand, within GFF4240 at 152.635 kb on - strand, within GFF4240 at 152.635 kb on - strand, within GFF4240 at 152.635 kb on - strand, within GFF4240 at 152.742 kb on + strand at 152.743 kb on - strand at 152.743 kb on - strand at 152.808 kb on + strand at 152.808 kb on + strand at 152.909 kb on + strand at 152.909 kb on + strand at 152.909 kb on + strand at 152.909 kb on + strand at 152.910 kb on - strand at 152.910 kb on - strand at 152.910 kb on - strand at 152.910 kb on - strand at 152.910 kb on - strand at 152.910 kb on - strand at 152.910 kb on - strand at 152.910 kb on - strand at 152.943 kb on - strand at 153.146 kb on + strand at 153.146 kb on + strand at 153.146 kb on + strand at 153.146 kb on + strand at 153.147 kb on - strand at 153.147 kb on - strand at 153.716 kb on + strand, within GFF4241 at 153.717 kb on - strand, within GFF4241 at 153.717 kb on - strand, within GFF4241 at 153.719 kb on + strand, within GFF4241 at 153.719 kb on + strand, within GFF4241 at 153.719 kb on + strand, within GFF4241 at 153.719 kb on + strand, within GFF4241 at 153.719 kb on + strand, within GFF4241 at 153.719 kb on + strand, within GFF4241 at 153.719 kb on + strand, within GFF4241 at 153.719 kb on + strand, within GFF4241 at 153.719 kb on + strand, within GFF4241 at 153.719 kb on + strand, within GFF4241 at 153.720 kb on - strand, within GFF4241 at 153.720 kb on - strand, within GFF4241 at 153.720 kb on - strand, within GFF4241 at 153.720 kb on - strand, within GFF4241 at 153.720 kb on - strand, within GFF4241 at 153.720 kb on - strand, within GFF4241 at 153.831 kb on - strand, within GFF4241
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with calcium pantothenate 10 mg/mL remove 150,163 + GFF4239 0.18 -0.1 150,163 + GFF4239 0.18 -0.8 150,163 + GFF4239 0.18 -0.4 150,163 + GFF4239 0.18 +0.2 150,163 + GFF4239 0.18 +0.8 150,164 - GFF4239 0.18 +0.8 150,164 - GFF4239 0.18 -0.5 150,164 - GFF4239 0.18 -0.2 150,164 - GFF4239 0.18 +0.3 150,164 - GFF4239 0.18 -0.9 150,430 + GFF4239 0.45 -0.8 150,430 + GFF4239 0.45 -1.0 150,430 + GFF4239 0.45 +0.1 150,430 + GFF4239 0.45 -0.2 150,431 - GFF4239 0.45 -0.8 150,431 - GFF4239 0.45 +0.7 150,431 - GFF4239 0.45 +0.7 150,650 - GFF4239 0.68 +0.3 150,650 - GFF4239 0.68 -1.0 150,944 + +0.5 150,944 + -0.6 150,945 - +0.2 150,955 + +0.2 150,955 + +1.0 150,955 + +0.3 150,956 - -1.2 150,980 + +1.1 150,980 + -0.7 150,980 + -1.3 150,981 - -0.4 150,981 - +0.8 150,981 - +0.5 151,372 - GFF4240 0.13 +0.3 151,486 - GFF4240 0.19 +0.5 151,530 + GFF4240 0.22 -1.0 151,531 - GFF4240 0.22 +0.1 151,675 - GFF4240 0.30 -0.8 151,932 + GFF4240 0.45 -0.2 151,932 + GFF4240 0.45 -0.4 151,932 + GFF4240 0.45 -0.2 151,932 + GFF4240 0.45 +0.4 151,933 - GFF4240 0.45 -0.1 151,933 - GFF4240 0.45 -0.2 152,442 + GFF4240 0.75 -0.1 152,443 - GFF4240 0.75 -0.2 152,478 + GFF4240 0.77 -0.4 152,479 - GFF4240 0.77 +0.8 152,523 + GFF4240 0.80 +0.4 152,524 - GFF4240 0.80 -2.1 152,524 - GFF4240 0.80 -0.1 152,524 - GFF4240 0.80 +0.4 152,524 - GFF4240 0.80 +0.9 152,602 + GFF4240 0.84 +0.2 152,634 + GFF4240 0.86 -0.9 152,634 + GFF4240 0.86 -0.2 152,634 + GFF4240 0.86 -1.2 152,635 - GFF4240 0.86 +0.1 152,635 - GFF4240 0.86 -0.2 152,635 - GFF4240 0.86 +0.3 152,742 + -0.8 152,743 - -0.1 152,743 - +0.3 152,808 + -1.1 152,808 + +0.4 152,909 + -1.2 152,909 + +0.7 152,909 + +0.6 152,909 + -0.5 152,910 - -0.3 152,910 - -0.1 152,910 - -0.2 152,910 - -0.5 152,910 - -1.2 152,910 - -0.0 152,910 - +0.2 152,910 - +0.2 152,943 - -0.9 153,146 + -0.4 153,146 + +1.6 153,146 + +0.4 153,146 + -0.1 153,147 - +0.3 153,147 - -0.4 153,716 + GFF4241 0.28 -0.2 153,717 - GFF4241 0.28 -0.2 153,717 - GFF4241 0.28 -0.5 153,719 + GFF4241 0.28 -0.5 153,719 + GFF4241 0.28 +2.4 153,719 + GFF4241 0.28 -0.7 153,719 + GFF4241 0.28 -0.4 153,719 + GFF4241 0.28 +0.4 153,719 + GFF4241 0.28 +0.0 153,719 + GFF4241 0.28 +0.2 153,719 + GFF4241 0.28 -0.3 153,719 + GFF4241 0.28 +0.8 153,719 + GFF4241 0.28 +1.0 153,720 - GFF4241 0.28 +0.8 153,720 - GFF4241 0.28 -0.2 153,720 - GFF4241 0.28 +1.4 153,720 - GFF4241 0.28 -0.2 153,720 - GFF4241 0.28 +0.3 153,720 - GFF4241 0.28 -1.0 153,831 - GFF4241 0.32 +0.2
Or see this region's nucleotide sequence