Strain Fitness in Variovorax sp. SCN45 around GFF4197

Experiment: M9 with calcium pantothenate 10 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9 with calcium pantothenate 10 mg/mL
111,277	+				-1.0
111,277	+				-0.2
111,277	+				+0.3
111,278	-				-0.4
111,594	-		GFF4196	0.25	+0.8
111,859	-		GFF4196	0.55	-0.8
112,086	+		GFF4196	0.81	-1.1
112,086	+		GFF4196	0.81	-0.7
112,131	+		GFF4196	0.86	+1.8
112,132	-		GFF4196	0.86	-0.4
112,132	-		GFF4196	0.86	-0.5
112,132	-		GFF4196	0.86	+0.4
112,285	-				-0.3
112,635	+		GFF4197	0.41	-0.0
112,636	-		GFF4197	0.41	+0.5
113,257	-				+1.2
113,305	+				+0.8
113,305	+				-0.5
113,384	+		GFF4198	0.11	+0.1
113,504	+		GFF4198	0.22	-0.7
113,700	-		GFF4198	0.40	-0.8
113,711	+		GFF4198	0.41	-0.9
113,715	-		GFF4198	0.42	+0.2
113,985	-		GFF4198	0.66	-0.3
114,009	-		GFF4198	0.68	-0.1