Experiment: M9 with calcium pantothenate 10 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF3871 and GFF3872 are separated by 136 nucleotides GFF3872 and GFF3873 overlap by 4 nucleotides GFF3873 and GFF3874 are separated by 13 nucleotides
GFF3871 - GTP-binding protein Era, at 69,204 to 70,169
GFF3871
GFF3872 - DNA recombination and repair protein RecO, at 70,306 to 71,076
GFF3872
GFF3873 - Pyridoxine 5'-phosphate synthase (EC 2.6.99.2), at 71,073 to 71,834
GFF3873
GFF3874 - Holo-[acyl-carrier-protein] synthase (EC 2.7.8.7), at 71,848 to 72,240
GFF3874
Position (kb) 70
71
72 Strain fitness (log2 ratio) -2
-1
0
1
2 at 70.162 kb on - strand at 70.167 kb on + strand at 70.168 kb on - strand at 70.168 kb on - strand at 70.294 kb on + strand at 70.294 kb on + strand at 70.295 kb on - strand at 70.339 kb on + strand at 70.339 kb on + strand at 70.339 kb on + strand at 70.339 kb on + strand at 70.339 kb on + strand at 70.339 kb on + strand at 70.339 kb on + strand at 70.339 kb on + strand at 70.339 kb on + strand at 70.339 kb on + strand at 70.339 kb on + strand at 70.339 kb on + strand at 70.339 kb on + strand at 70.339 kb on + strand at 70.339 kb on + strand at 70.339 kb on + strand at 70.339 kb on + strand at 70.339 kb on + strand at 70.340 kb on - strand at 70.340 kb on - strand at 70.340 kb on - strand at 70.340 kb on - strand at 70.340 kb on - strand at 70.340 kb on - strand at 70.340 kb on - strand at 70.340 kb on - strand at 70.340 kb on - strand at 70.340 kb on - strand at 70.354 kb on + strand at 70.355 kb on - strand at 70.495 kb on + strand, within GFF3872 at 70.495 kb on + strand, within GFF3872 at 70.495 kb on + strand, within GFF3872 at 70.495 kb on + strand, within GFF3872 at 70.495 kb on + strand, within GFF3872 at 70.496 kb on - strand, within GFF3872 at 70.496 kb on - strand, within GFF3872 at 70.496 kb on - strand, within GFF3872 at 70.496 kb on - strand, within GFF3872 at 70.585 kb on + strand, within GFF3872 at 70.585 kb on + strand, within GFF3872 at 70.585 kb on + strand, within GFF3872 at 70.588 kb on + strand, within GFF3872 at 70.588 kb on + strand, within GFF3872 at 70.588 kb on + strand, within GFF3872 at 70.588 kb on + strand, within GFF3872 at 70.588 kb on + strand, within GFF3872 at 70.588 kb on + strand, within GFF3872 at 70.588 kb on + strand, within GFF3872 at 70.588 kb on + strand, within GFF3872 at 70.588 kb on + strand, within GFF3872 at 70.588 kb on + strand, within GFF3872 at 70.588 kb on + strand, within GFF3872 at 70.588 kb on + strand, within GFF3872 at 70.588 kb on + strand, within GFF3872 at 70.588 kb on + strand, within GFF3872 at 70.588 kb on + strand, within GFF3872 at 70.588 kb on + strand, within GFF3872 at 70.588 kb on + strand, within GFF3872 at 70.588 kb on + strand, within GFF3872 at 70.588 kb on + strand, within GFF3872 at 70.589 kb on - strand, within GFF3872 at 70.589 kb on - strand, within GFF3872 at 70.589 kb on - strand, within GFF3872 at 70.589 kb on - strand, within GFF3872 at 70.589 kb on - strand, within GFF3872 at 70.589 kb on - strand, within GFF3872 at 70.589 kb on - strand, within GFF3872 at 70.589 kb on - strand, within GFF3872 at 70.589 kb on - strand, within GFF3872 at 70.654 kb on + strand, within GFF3872 at 70.654 kb on + strand, within GFF3872 at 70.654 kb on + strand, within GFF3872 at 70.655 kb on - strand, within GFF3872 at 70.655 kb on - strand, within GFF3872 at 70.822 kb on + strand, within GFF3872 at 70.823 kb on - strand, within GFF3872 at 71.014 kb on + strand at 71.014 kb on + strand at 71.014 kb on + strand at 71.014 kb on + strand at 71.014 kb on + strand at 71.014 kb on + strand at 71.014 kb on + strand at 71.015 kb on - strand at 71.015 kb on - strand at 71.015 kb on - strand at 71.015 kb on - strand at 71.015 kb on - strand at 71.015 kb on - strand at 71.015 kb on - strand at 71.015 kb on - strand at 71.015 kb on - strand at 71.040 kb on + strand at 71.040 kb on + strand at 71.041 kb on - strand at 71.072 kb on + strand at 71.072 kb on + strand at 71.072 kb on + strand at 71.072 kb on + strand at 71.072 kb on + strand at 71.072 kb on + strand at 71.072 kb on + strand at 71.072 kb on + strand at 71.073 kb on - strand at 71.073 kb on - strand at 71.073 kb on - strand at 71.073 kb on - strand at 71.073 kb on - strand at 71.073 kb on - strand at 71.854 kb on + strand at 71.854 kb on + strand at 71.854 kb on + strand at 71.855 kb on - strand at 71.856 kb on - strand at 72.004 kb on + strand, within GFF3874 at 72.004 kb on + strand, within GFF3874 at 72.005 kb on - strand, within GFF3874 at 72.005 kb on - strand, within GFF3874
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with calcium pantothenate 10 mg/mL remove 70,162 - -2.2 70,167 + -1.7 70,168 - +0.7 70,168 - -0.1 70,294 + +0.2 70,294 + -0.3 70,295 - -0.7 70,339 + +0.4 70,339 + -0.4 70,339 + +0.6 70,339 + -1.0 70,339 + -1.3 70,339 + +0.3 70,339 + +0.3 70,339 + +0.6 70,339 + -0.2 70,339 + +0.1 70,339 + -0.5 70,339 + -0.5 70,339 + +0.7 70,339 + +0.9 70,339 + +0.7 70,339 + -0.4 70,339 + +0.2 70,339 + -0.9 70,340 - -1.1 70,340 - -0.7 70,340 - -0.1 70,340 - -1.3 70,340 - -2.4 70,340 - -1.3 70,340 - -0.4 70,340 - -1.4 70,340 - +0.3 70,340 - +0.1 70,354 + +0.5 70,355 - +0.8 70,495 + GFF3872 0.25 +1.0 70,495 + GFF3872 0.25 -0.6 70,495 + GFF3872 0.25 -0.4 70,495 + GFF3872 0.25 -1.1 70,495 + GFF3872 0.25 -0.4 70,496 - GFF3872 0.25 -1.8 70,496 - GFF3872 0.25 +0.0 70,496 - GFF3872 0.25 -0.9 70,496 - GFF3872 0.25 +0.1 70,585 + GFF3872 0.36 -0.5 70,585 + GFF3872 0.36 +0.4 70,585 + GFF3872 0.36 +0.1 70,588 + GFF3872 0.37 -0.5 70,588 + GFF3872 0.37 +1.3 70,588 + GFF3872 0.37 -1.0 70,588 + GFF3872 0.37 -1.1 70,588 + GFF3872 0.37 -0.0 70,588 + GFF3872 0.37 -1.5 70,588 + GFF3872 0.37 -0.7 70,588 + GFF3872 0.37 +0.2 70,588 + GFF3872 0.37 -0.8 70,588 + GFF3872 0.37 -0.3 70,588 + GFF3872 0.37 -0.4 70,588 + GFF3872 0.37 -0.8 70,588 + GFF3872 0.37 +0.5 70,588 + GFF3872 0.37 +0.7 70,588 + GFF3872 0.37 -0.8 70,588 + GFF3872 0.37 +0.4 70,588 + GFF3872 0.37 -1.0 70,588 + GFF3872 0.37 -1.1 70,588 + GFF3872 0.37 -1.7 70,589 - GFF3872 0.37 -1.3 70,589 - GFF3872 0.37 -0.7 70,589 - GFF3872 0.37 -0.5 70,589 - GFF3872 0.37 -1.1 70,589 - GFF3872 0.37 -0.5 70,589 - GFF3872 0.37 -1.1 70,589 - GFF3872 0.37 -0.5 70,589 - GFF3872 0.37 -0.9 70,589 - GFF3872 0.37 -0.5 70,654 + GFF3872 0.45 +0.1 70,654 + GFF3872 0.45 -1.2 70,654 + GFF3872 0.45 +2.0 70,655 - GFF3872 0.45 -1.7 70,655 - GFF3872 0.45 -0.4 70,822 + GFF3872 0.67 -0.5 70,823 - GFF3872 0.67 -1.5 71,014 + -0.2 71,014 + -2.7 71,014 + -1.0 71,014 + -0.3 71,014 + -1.7 71,014 + +0.3 71,014 + -0.2 71,015 - +0.6 71,015 - -0.2 71,015 - -0.5 71,015 - -1.1 71,015 - -0.5 71,015 - +0.2 71,015 - -0.4 71,015 - +0.3 71,015 - +0.0 71,040 + -0.7 71,040 + -0.9 71,041 - -2.3 71,072 + -0.5 71,072 + -1.4 71,072 + -0.6 71,072 + -0.8 71,072 + +1.4 71,072 + -0.3 71,072 + -0.3 71,072 + -0.1 71,073 - +0.7 71,073 - -0.2 71,073 - -2.0 71,073 - +0.4 71,073 - -0.4 71,073 - -1.0 71,854 + -0.5 71,854 + -0.9 71,854 + -0.4 71,855 - -0.0 71,856 - -0.2 72,004 + GFF3874 0.40 +0.9 72,004 + GFF3874 0.40 -0.2 72,005 - GFF3874 0.40 +0.2 72,005 - GFF3874 0.40 +0.4
Or see this region's nucleotide sequence