Strain Fitness in Variovorax sp. SCN45 around GFF30

Experiment: M9 with calcium pantothenate 10 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9 with calcium pantothenate 10 mg/mL
34,336	+				+0.3
34,336	+				-0.3
34,931	+		GFF30	0.48	-1.6
34,931	+		GFF30	0.48	+0.0
34,937	+		GFF30	0.48	-0.6
35,183	+		GFF30	0.72	+1.0
35,183	+		GFF30	0.72	-1.0
35,183	+		GFF30	0.72	-1.4
35,255	+		GFF30	0.79	+0.1
35,255	+		GFF30	0.79	+0.6
35,255	+		GFF30	0.79	-2.3
35,255	+		GFF30	0.79	-0.4
35,255	+		GFF30	0.79	+0.4
35,255	+		GFF30	0.79	-0.3
35,255	+		GFF30	0.79	+1.4
35,255	+		GFF30	0.79	-0.8
35,255	+		GFF30	0.79	-0.6
35,255	+		GFF30	0.79	-0.5
35,348	+		GFF30	0.88	+0.2