Experiment: M9 with calcium pantothenate 10 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF2819 and GFF2820 are separated by 49 nucleotides GFF2820 and GFF2821 overlap by 4 nucleotides
GFF2819 - Phosphoenolpyruvate synthase regulatory protein, at 246,024 to 246,851
GFF2819
GFF2820 - ABC-type hemin transport system, ATPase component, at 246,901 to 247,707
GFF2820
GFF2821 - Hemin ABC transporter, permease protein, at 247,704 to 248,738
GFF2821
Position (kb) 246
247
248 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 245.984 kb on + strand at 245.985 kb on - strand at 245.985 kb on - strand at 245.985 kb on - strand at 245.985 kb on - strand at 245.985 kb on - strand at 246.329 kb on - strand, within GFF2819 at 246.393 kb on + strand, within GFF2819 at 246.393 kb on + strand, within GFF2819 at 246.393 kb on + strand, within GFF2819 at 246.393 kb on + strand, within GFF2819 at 246.393 kb on + strand, within GFF2819 at 246.394 kb on - strand, within GFF2819 at 246.522 kb on + strand, within GFF2819 at 246.522 kb on + strand, within GFF2819 at 246.523 kb on - strand, within GFF2819 at 246.558 kb on + strand, within GFF2819 at 246.846 kb on + strand at 246.846 kb on + strand at 246.847 kb on - strand at 246.914 kb on + strand at 246.914 kb on + strand at 246.915 kb on - strand at 246.915 kb on - strand at 246.915 kb on - strand at 246.915 kb on - strand at 246.915 kb on - strand at 246.915 kb on - strand at 247.045 kb on + strand, within GFF2820 at 247.045 kb on + strand, within GFF2820 at 247.045 kb on + strand, within GFF2820 at 247.045 kb on + strand, within GFF2820 at 247.046 kb on - strand, within GFF2820 at 247.046 kb on - strand, within GFF2820 at 247.046 kb on - strand, within GFF2820 at 247.046 kb on - strand, within GFF2820 at 247.046 kb on - strand, within GFF2820 at 247.046 kb on - strand, within GFF2820 at 247.046 kb on - strand, within GFF2820 at 247.059 kb on - strand, within GFF2820 at 247.248 kb on + strand, within GFF2820 at 247.249 kb on - strand, within GFF2820 at 247.249 kb on - strand, within GFF2820 at 247.379 kb on + strand, within GFF2820 at 247.380 kb on - strand, within GFF2820 at 247.644 kb on + strand at 247.644 kb on + strand at 247.707 kb on + strand at 247.707 kb on + strand at 247.707 kb on + strand at 247.707 kb on + strand at 247.707 kb on + strand at 247.707 kb on + strand at 247.708 kb on - strand at 247.708 kb on - strand at 247.708 kb on - strand at 247.708 kb on - strand at 247.708 kb on - strand at 247.708 kb on - strand at 247.708 kb on - strand at 247.708 kb on - strand at 247.708 kb on - strand at 247.708 kb on - strand at 247.708 kb on - strand at 247.708 kb on - strand at 247.708 kb on - strand at 247.708 kb on - strand at 247.817 kb on + strand, within GFF2821 at 248.302 kb on + strand, within GFF2821 at 248.302 kb on + strand, within GFF2821 at 248.302 kb on + strand, within GFF2821 at 248.303 kb on - strand, within GFF2821 at 248.303 kb on - strand, within GFF2821 at 248.303 kb on - strand, within GFF2821 at 248.303 kb on - strand, within GFF2821 at 248.647 kb on + strand at 248.647 kb on + strand at 248.647 kb on + strand at 248.647 kb on + strand at 248.647 kb on + strand at 248.647 kb on + strand at 248.647 kb on + strand at 248.648 kb on - strand at 248.648 kb on - strand at 248.648 kb on - strand at 248.648 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with calcium pantothenate 10 mg/mL remove 245,984 + -0.6 245,985 - -0.4 245,985 - +0.1 245,985 - -0.4 245,985 - -1.9 245,985 - -0.6 246,329 - GFF2819 0.37 +1.0 246,393 + GFF2819 0.45 -1.5 246,393 + GFF2819 0.45 -0.6 246,393 + GFF2819 0.45 +1.3 246,393 + GFF2819 0.45 -0.6 246,393 + GFF2819 0.45 -0.6 246,394 - GFF2819 0.45 -1.3 246,522 + GFF2819 0.60 +1.3 246,522 + GFF2819 0.60 -1.9 246,523 - GFF2819 0.60 -3.3 246,558 + GFF2819 0.64 -1.7 246,846 + -0.3 246,846 + +0.4 246,847 - +0.4 246,914 + -0.4 246,914 + -0.3 246,915 - +0.1 246,915 - +1.4 246,915 - -0.2 246,915 - +0.3 246,915 - -0.1 246,915 - +0.3 247,045 + GFF2820 0.18 +0.3 247,045 + GFF2820 0.18 -0.0 247,045 + GFF2820 0.18 +1.7 247,045 + GFF2820 0.18 -0.7 247,046 - GFF2820 0.18 +0.1 247,046 - GFF2820 0.18 -1.2 247,046 - GFF2820 0.18 -1.1 247,046 - GFF2820 0.18 -0.1 247,046 - GFF2820 0.18 -0.8 247,046 - GFF2820 0.18 -0.9 247,046 - GFF2820 0.18 -0.3 247,059 - GFF2820 0.20 -1.6 247,248 + GFF2820 0.43 +0.2 247,249 - GFF2820 0.43 -0.7 247,249 - GFF2820 0.43 +0.1 247,379 + GFF2820 0.59 -0.7 247,380 - GFF2820 0.59 -0.7 247,644 + -0.2 247,644 + +0.1 247,707 + -0.3 247,707 + -1.2 247,707 + -1.7 247,707 + -0.2 247,707 + -1.3 247,707 + +0.1 247,708 - +0.0 247,708 - +0.7 247,708 - +0.7 247,708 - -0.2 247,708 - -0.3 247,708 - -1.5 247,708 - +1.0 247,708 - +0.2 247,708 - -1.3 247,708 - -0.5 247,708 - -0.6 247,708 - +0.4 247,708 - -0.9 247,708 - +0.6 247,817 + GFF2821 0.11 -1.3 248,302 + GFF2821 0.58 +0.9 248,302 + GFF2821 0.58 -1.6 248,302 + GFF2821 0.58 -0.6 248,303 - GFF2821 0.58 -2.3 248,303 - GFF2821 0.58 +0.1 248,303 - GFF2821 0.58 -0.7 248,303 - GFF2821 0.58 -0.3 248,647 + -0.2 248,647 + +1.7 248,647 + -0.0 248,647 + +0.3 248,647 + +0.2 248,647 + -1.2 248,647 + -1.7 248,648 - -0.7 248,648 - -0.7 248,648 - +0.8 248,648 - -0.2
Or see this region's nucleotide sequence