Experiment: M9 with calcium pantothenate 10 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF2656 and GFF2657 overlap by 4 nucleotides GFF2657 and GFF2658 are separated by 79 nucleotides
GFF2656 - Acyltransferase 3, at 77,333 to 78,508
GFF2656
GFF2657 - putative oxidoreductase, nitronate monooxygenase family, at 78,505 to 79,467
GFF2657
GFF2658 - 3-methylmercaptopropionyl-CoA dehydrogenase (DmdC), at 79,547 to 81,337
GFF2658
Position (kb) 78
79
80 Strain fitness (log2 ratio) -2
-1
0
1
2 at 77.565 kb on + strand, within GFF2656 at 77.805 kb on + strand, within GFF2656 at 77.805 kb on + strand, within GFF2656 at 77.806 kb on - strand, within GFF2656 at 77.806 kb on - strand, within GFF2656 at 77.806 kb on - strand, within GFF2656 at 77.821 kb on - strand, within GFF2656 at 78.015 kb on + strand, within GFF2656 at 78.016 kb on - strand, within GFF2656 at 78.042 kb on + strand, within GFF2656 at 78.043 kb on - strand, within GFF2656 at 78.094 kb on + strand, within GFF2656 at 78.094 kb on + strand, within GFF2656 at 78.094 kb on + strand, within GFF2656 at 78.094 kb on + strand, within GFF2656 at 78.094 kb on + strand, within GFF2656 at 78.094 kb on + strand, within GFF2656 at 78.095 kb on - strand, within GFF2656 at 78.095 kb on - strand, within GFF2656 at 78.095 kb on - strand, within GFF2656 at 78.095 kb on - strand, within GFF2656 at 78.095 kb on - strand, within GFF2656 at 78.354 kb on + strand, within GFF2656 at 78.379 kb on - strand, within GFF2656 at 78.536 kb on + strand at 78.537 kb on - strand at 78.734 kb on + strand, within GFF2657 at 78.735 kb on - strand, within GFF2657 at 78.809 kb on + strand, within GFF2657 at 78.809 kb on + strand, within GFF2657 at 78.809 kb on + strand, within GFF2657 at 78.809 kb on + strand, within GFF2657 at 78.810 kb on - strand, within GFF2657 at 79.101 kb on - strand, within GFF2657 at 79.101 kb on - strand, within GFF2657 at 79.101 kb on - strand, within GFF2657 at 79.101 kb on - strand, within GFF2657 at 79.166 kb on + strand, within GFF2657 at 79.166 kb on + strand, within GFF2657 at 79.166 kb on + strand, within GFF2657 at 79.166 kb on + strand, within GFF2657 at 79.167 kb on - strand, within GFF2657 at 79.271 kb on + strand, within GFF2657 at 79.271 kb on + strand, within GFF2657 at 79.496 kb on + strand at 79.496 kb on + strand at 79.642 kb on - strand at 79.642 kb on - strand at 79.642 kb on - strand at 79.770 kb on + strand, within GFF2658 at 79.770 kb on + strand, within GFF2658 at 80.025 kb on + strand, within GFF2658 at 80.025 kb on + strand, within GFF2658 at 80.025 kb on + strand, within GFF2658 at 80.025 kb on + strand, within GFF2658 at 80.026 kb on - strand, within GFF2658 at 80.026 kb on - strand, within GFF2658 at 80.026 kb on - strand, within GFF2658 at 80.055 kb on + strand, within GFF2658 at 80.055 kb on + strand, within GFF2658 at 80.055 kb on + strand, within GFF2658 at 80.056 kb on - strand, within GFF2658 at 80.056 kb on - strand, within GFF2658 at 80.146 kb on - strand, within GFF2658 at 80.176 kb on - strand, within GFF2658 at 80.176 kb on - strand, within GFF2658 at 80.232 kb on + strand, within GFF2658 at 80.403 kb on + strand, within GFF2658 at 80.403 kb on + strand, within GFF2658 at 80.404 kb on - strand, within GFF2658 at 80.446 kb on - strand, within GFF2658
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with calcium pantothenate 10 mg/mL remove 77,565 + GFF2656 0.20 +1.9 77,805 + GFF2656 0.40 +0.5 77,805 + GFF2656 0.40 -0.3 77,806 - GFF2656 0.40 -0.2 77,806 - GFF2656 0.40 +0.3 77,806 - GFF2656 0.40 -0.6 77,821 - GFF2656 0.41 -0.5 78,015 + GFF2656 0.58 -0.4 78,016 - GFF2656 0.58 -1.0 78,042 + GFF2656 0.60 -0.2 78,043 - GFF2656 0.60 -1.5 78,094 + GFF2656 0.65 -0.7 78,094 + GFF2656 0.65 +0.0 78,094 + GFF2656 0.65 -0.5 78,094 + GFF2656 0.65 +0.1 78,094 + GFF2656 0.65 -0.4 78,094 + GFF2656 0.65 +0.9 78,095 - GFF2656 0.65 -0.2 78,095 - GFF2656 0.65 +0.1 78,095 - GFF2656 0.65 -0.1 78,095 - GFF2656 0.65 -1.3 78,095 - GFF2656 0.65 -0.8 78,354 + GFF2656 0.87 -0.4 78,379 - GFF2656 0.89 -0.6 78,536 + +0.6 78,537 - +0.2 78,734 + GFF2657 0.24 -0.6 78,735 - GFF2657 0.24 -0.5 78,809 + GFF2657 0.32 -0.5 78,809 + GFF2657 0.32 -2.0 78,809 + GFF2657 0.32 -0.4 78,809 + GFF2657 0.32 -1.9 78,810 - GFF2657 0.32 +0.7 79,101 - GFF2657 0.62 -0.1 79,101 - GFF2657 0.62 +1.2 79,101 - GFF2657 0.62 -0.4 79,101 - GFF2657 0.62 -1.1 79,166 + GFF2657 0.69 -0.2 79,166 + GFF2657 0.69 -0.2 79,166 + GFF2657 0.69 -0.6 79,166 + GFF2657 0.69 -0.2 79,167 - GFF2657 0.69 +0.7 79,271 + GFF2657 0.80 -0.7 79,271 + GFF2657 0.80 -0.7 79,496 + +0.0 79,496 + -0.8 79,642 - -0.3 79,642 - -0.5 79,642 - +0.2 79,770 + GFF2658 0.12 -0.3 79,770 + GFF2658 0.12 -0.6 80,025 + GFF2658 0.27 -1.1 80,025 + GFF2658 0.27 -0.4 80,025 + GFF2658 0.27 +0.3 80,025 + GFF2658 0.27 +0.9 80,026 - GFF2658 0.27 -1.0 80,026 - GFF2658 0.27 -2.4 80,026 - GFF2658 0.27 +1.0 80,055 + GFF2658 0.28 -2.0 80,055 + GFF2658 0.28 +1.0 80,055 + GFF2658 0.28 -1.0 80,056 - GFF2658 0.28 +1.7 80,056 - GFF2658 0.28 -0.3 80,146 - GFF2658 0.33 +0.3 80,176 - GFF2658 0.35 -0.6 80,176 - GFF2658 0.35 -0.8 80,232 + GFF2658 0.38 -1.8 80,403 + GFF2658 0.48 -0.9 80,403 + GFF2658 0.48 -1.3 80,404 - GFF2658 0.48 -0.2 80,446 - GFF2658 0.50 +0.8
Or see this region's nucleotide sequence