Experiment: M9 with calcium pantothenate 10 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF2462 and GFF2463 are separated by 21 nucleotides GFF2463 and GFF2464 overlap by 4 nucleotides GFF2464 and GFF2465 are separated by 33 nucleotides GFF2465 and GFF2466 overlap by 4 nucleotides
GFF2462 - Mg(2+) transport ATPase, P-type (EC 3.6.3.2), at 520,488 to 523,253
GFF2462
GFF2463 - Response regulator BaeR, at 523,275 to 523,973
GFF2463
GFF2464 - Sensory histidine kinase BaeS, at 523,970 to 525,730
GFF2464
GFF2465 - no description, at 525,764 to 525,925
GFF2465
GFF2466 - no description, at 525,922 to 526,788
GFF2466
Position (kb) 523
524
525
526 Strain fitness (log2 ratio) -2
-1
0
1 at 523.162 kb on - strand at 523.195 kb on - strand at 523.227 kb on + strand at 523.681 kb on + strand, within GFF2463 at 523.682 kb on - strand, within GFF2463 at 523.915 kb on + strand at 523.916 kb on - strand at 524.272 kb on - strand, within GFF2464 at 525.072 kb on + strand, within GFF2464 at 525.073 kb on - strand, within GFF2464 at 525.073 kb on - strand, within GFF2464 at 525.073 kb on - strand, within GFF2464 at 525.073 kb on - strand, within GFF2464 at 525.255 kb on + strand, within GFF2464 at 525.262 kb on - strand, within GFF2464 at 525.393 kb on + strand, within GFF2464 at 525.393 kb on + strand, within GFF2464 at 525.453 kb on + strand, within GFF2464 at 525.453 kb on + strand, within GFF2464 at 526.069 kb on + strand, within GFF2466 at 526.069 kb on + strand, within GFF2466 at 526.069 kb on + strand, within GFF2466 at 526.070 kb on - strand, within GFF2466 at 526.070 kb on - strand, within GFF2466 at 526.070 kb on - strand, within GFF2466 at 526.217 kb on - strand, within GFF2466 at 526.445 kb on - strand, within GFF2466 at 526.564 kb on + strand, within GFF2466
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with calcium pantothenate 10 mg/mL remove 523,162 - +1.0 523,195 - -0.3 523,227 + -1.0 523,681 + GFF2463 0.58 -1.3 523,682 - GFF2463 0.58 -1.8 523,915 + -2.0 523,916 - -0.2 524,272 - GFF2464 0.17 -0.6 525,072 + GFF2464 0.63 -0.6 525,073 - GFF2464 0.63 +0.3 525,073 - GFF2464 0.63 -0.6 525,073 - GFF2464 0.63 -0.8 525,073 - GFF2464 0.63 +0.3 525,255 + GFF2464 0.73 +1.0 525,262 - GFF2464 0.73 -1.0 525,393 + GFF2464 0.81 -0.8 525,393 + GFF2464 0.81 -0.4 525,453 + GFF2464 0.84 -1.9 525,453 + GFF2464 0.84 -0.5 526,069 + GFF2466 0.17 -0.2 526,069 + GFF2466 0.17 +0.2 526,069 + GFF2466 0.17 -0.8 526,070 - GFF2466 0.17 +0.3 526,070 - GFF2466 0.17 +0.4 526,070 - GFF2466 0.17 -1.6 526,217 - GFF2466 0.34 -0.3 526,445 - GFF2466 0.60 +0.1 526,564 + GFF2466 0.74 +0.3
Or see this region's nucleotide sequence