Experiment: M9 with calcium pantothenate 10 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF2395 and GFF2396 overlap by 13 nucleotides GFF2396 and GFF2397 overlap by 4 nucleotides
GFF2395 - D-threo-3-hydroxyaspartate ammonia-lyase (EC 4.3.1.-), at 444,191 to 445,384
GFF2395
GFF2396 - MlrC, at 445,372 to 447,765
GFF2396
GFF2397 - Beta-lactamase class C-like and penicillin binding proteins (PBPs) superfamily, at 447,762 to 449,456
GFF2397
Position (kb) 445
446
447
448 Strain fitness (log2 ratio) -1
0
1 at 444.646 kb on - strand, within GFF2395 at 444.828 kb on + strand, within GFF2395 at 444.829 kb on - strand, within GFF2395 at 445.116 kb on + strand, within GFF2395 at 445.117 kb on - strand, within GFF2395 at 445.149 kb on + strand, within GFF2395 at 445.707 kb on - strand, within GFF2396 at 445.707 kb on - strand, within GFF2396 at 445.928 kb on + strand, within GFF2396 at 445.929 kb on - strand, within GFF2396 at 445.929 kb on - strand, within GFF2396 at 445.929 kb on - strand, within GFF2396 at 446.084 kb on + strand, within GFF2396 at 446.085 kb on - strand, within GFF2396 at 446.085 kb on - strand, within GFF2396 at 446.085 kb on - strand, within GFF2396 at 446.085 kb on - strand, within GFF2396 at 446.099 kb on + strand, within GFF2396 at 446.099 kb on + strand, within GFF2396 at 446.100 kb on - strand, within GFF2396 at 446.243 kb on + strand, within GFF2396 at 446.244 kb on - strand, within GFF2396 at 446.333 kb on + strand, within GFF2396 at 446.402 kb on + strand, within GFF2396 at 446.402 kb on + strand, within GFF2396 at 446.402 kb on + strand, within GFF2396 at 446.402 kb on + strand, within GFF2396 at 446.402 kb on + strand, within GFF2396 at 446.403 kb on - strand, within GFF2396 at 446.403 kb on - strand, within GFF2396 at 446.403 kb on - strand, within GFF2396 at 447.284 kb on + strand, within GFF2396 at 447.284 kb on + strand, within GFF2396 at 447.528 kb on - strand at 447.684 kb on - strand at 447.684 kb on - strand at 447.783 kb on + strand at 447.784 kb on - strand at 447.784 kb on - strand at 448.034 kb on - strand, within GFF2397 at 448.368 kb on + strand, within GFF2397 at 448.579 kb on + strand, within GFF2397 at 448.580 kb on - strand, within GFF2397
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with calcium pantothenate 10 mg/mL remove 444,646 - GFF2395 0.38 +0.5 444,828 + GFF2395 0.53 -0.1 444,829 - GFF2395 0.53 +0.4 445,116 + GFF2395 0.77 -0.0 445,117 - GFF2395 0.78 +0.2 445,149 + GFF2395 0.80 -1.0 445,707 - GFF2396 0.14 -0.2 445,707 - GFF2396 0.14 -0.2 445,928 + GFF2396 0.23 -1.5 445,929 - GFF2396 0.23 -0.1 445,929 - GFF2396 0.23 -0.4 445,929 - GFF2396 0.23 +0.3 446,084 + GFF2396 0.30 -0.1 446,085 - GFF2396 0.30 +0.1 446,085 - GFF2396 0.30 -0.4 446,085 - GFF2396 0.30 +0.8 446,085 - GFF2396 0.30 -0.2 446,099 + GFF2396 0.30 +0.4 446,099 + GFF2396 0.30 -1.3 446,100 - GFF2396 0.30 -0.4 446,243 + GFF2396 0.36 -0.2 446,244 - GFF2396 0.36 +0.0 446,333 + GFF2396 0.40 -0.2 446,402 + GFF2396 0.43 -0.2 446,402 + GFF2396 0.43 +0.5 446,402 + GFF2396 0.43 -0.7 446,402 + GFF2396 0.43 -1.5 446,402 + GFF2396 0.43 -0.5 446,403 - GFF2396 0.43 -0.2 446,403 - GFF2396 0.43 -0.3 446,403 - GFF2396 0.43 -0.4 447,284 + GFF2396 0.80 -1.3 447,284 + GFF2396 0.80 -0.4 447,528 - -0.3 447,684 - +0.5 447,684 - -0.6 447,783 + -0.1 447,784 - -0.5 447,784 - +0.6 448,034 - GFF2397 0.16 -0.9 448,368 + GFF2397 0.36 -1.5 448,579 + GFF2397 0.48 +1.3 448,580 - GFF2397 0.48 -0.6
Or see this region's nucleotide sequence