Experiment: M9 with calcium pantothenate 10 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF2078 and GFF2079 are separated by 48 nucleotides GFF2079 and GFF2080 are separated by 22 nucleotides
GFF2078 - hypothetical protein, at 124,798 to 126,186
GFF2078
GFF2079 - BUG/TctC family periplasmic protein, at 126,235 to 127,227
GFF2079
GFF2080 - Protein acetyltransferase, at 127,250 to 129,361
GFF2080
Position (kb) 126
127
128 Strain fitness (log2 ratio) -2
-1
0
1
2 at 125.816 kb on + strand, within GFF2078 at 125.816 kb on + strand, within GFF2078 at 125.816 kb on + strand, within GFF2078 at 125.817 kb on - strand, within GFF2078 at 125.825 kb on + strand, within GFF2078 at 125.844 kb on - strand, within GFF2078 at 125.921 kb on + strand, within GFF2078 at 125.922 kb on - strand, within GFF2078 at 126.080 kb on + strand at 126.104 kb on + strand at 126.105 kb on - strand at 126.296 kb on + strand at 126.297 kb on - strand at 126.297 kb on - strand at 126.297 kb on - strand at 126.297 kb on - strand at 126.297 kb on - strand at 126.470 kb on + strand, within GFF2079 at 126.470 kb on + strand, within GFF2079 at 126.470 kb on + strand, within GFF2079 at 126.470 kb on + strand, within GFF2079 at 126.471 kb on - strand, within GFF2079 at 126.471 kb on - strand, within GFF2079 at 126.471 kb on - strand, within GFF2079 at 126.471 kb on - strand, within GFF2079 at 126.485 kb on + strand, within GFF2079 at 126.578 kb on + strand, within GFF2079 at 126.578 kb on + strand, within GFF2079 at 126.579 kb on - strand, within GFF2079 at 126.579 kb on - strand, within GFF2079 at 126.579 kb on - strand, within GFF2079 at 126.579 kb on - strand, within GFF2079 at 126.579 kb on - strand, within GFF2079 at 126.579 kb on - strand, within GFF2079 at 126.662 kb on + strand, within GFF2079 at 126.662 kb on + strand, within GFF2079 at 126.662 kb on + strand, within GFF2079 at 126.662 kb on + strand, within GFF2079 at 126.662 kb on + strand, within GFF2079 at 126.663 kb on - strand, within GFF2079 at 126.663 kb on - strand, within GFF2079 at 126.690 kb on - strand, within GFF2079 at 126.704 kb on + strand, within GFF2079 at 126.704 kb on + strand, within GFF2079 at 126.704 kb on + strand, within GFF2079 at 126.704 kb on + strand, within GFF2079 at 126.705 kb on - strand, within GFF2079 at 126.705 kb on - strand, within GFF2079 at 126.705 kb on - strand, within GFF2079 at 126.755 kb on + strand, within GFF2079 at 126.755 kb on + strand, within GFF2079 at 126.755 kb on + strand, within GFF2079 at 126.756 kb on - strand, within GFF2079 at 126.756 kb on - strand, within GFF2079 at 126.823 kb on + strand, within GFF2079 at 126.823 kb on + strand, within GFF2079 at 126.823 kb on + strand, within GFF2079 at 126.824 kb on - strand, within GFF2079 at 126.824 kb on - strand, within GFF2079 at 126.824 kb on - strand, within GFF2079 at 126.902 kb on + strand, within GFF2079 at 126.903 kb on - strand, within GFF2079 at 126.903 kb on - strand, within GFF2079 at 126.903 kb on - strand, within GFF2079 at 126.903 kb on - strand, within GFF2079 at 126.953 kb on + strand, within GFF2079 at 126.954 kb on - strand, within GFF2079 at 126.981 kb on - strand, within GFF2079 at 127.027 kb on + strand, within GFF2079 at 128.109 kb on + strand, within GFF2080
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with calcium pantothenate 10 mg/mL remove 125,816 + GFF2078 0.73 -0.4 125,816 + GFF2078 0.73 +0.2 125,816 + GFF2078 0.73 -0.5 125,817 - GFF2078 0.73 -1.1 125,825 + GFF2078 0.74 +0.4 125,844 - GFF2078 0.75 -0.5 125,921 + GFF2078 0.81 +0.5 125,922 - GFF2078 0.81 -0.5 126,080 + +0.3 126,104 + -0.1 126,105 - +1.2 126,296 + -0.5 126,297 - +0.6 126,297 - -0.8 126,297 - +0.8 126,297 - +0.3 126,297 - +1.9 126,470 + GFF2079 0.24 +0.3 126,470 + GFF2079 0.24 -0.4 126,470 + GFF2079 0.24 -0.3 126,470 + GFF2079 0.24 -0.3 126,471 - GFF2079 0.24 -0.3 126,471 - GFF2079 0.24 -0.1 126,471 - GFF2079 0.24 -0.6 126,471 - GFF2079 0.24 +0.1 126,485 + GFF2079 0.25 -1.1 126,578 + GFF2079 0.35 -0.1 126,578 + GFF2079 0.35 -0.3 126,579 - GFF2079 0.35 +0.9 126,579 - GFF2079 0.35 +1.1 126,579 - GFF2079 0.35 -0.6 126,579 - GFF2079 0.35 -0.4 126,579 - GFF2079 0.35 -0.6 126,579 - GFF2079 0.35 +1.4 126,662 + GFF2079 0.43 -0.3 126,662 + GFF2079 0.43 +0.3 126,662 + GFF2079 0.43 +1.9 126,662 + GFF2079 0.43 -0.6 126,662 + GFF2079 0.43 +1.3 126,663 - GFF2079 0.43 -0.3 126,663 - GFF2079 0.43 -1.1 126,690 - GFF2079 0.46 -0.1 126,704 + GFF2079 0.47 -0.1 126,704 + GFF2079 0.47 -0.7 126,704 + GFF2079 0.47 +0.5 126,704 + GFF2079 0.47 +0.3 126,705 - GFF2079 0.47 -0.1 126,705 - GFF2079 0.47 -1.0 126,705 - GFF2079 0.47 -2.4 126,755 + GFF2079 0.52 -0.4 126,755 + GFF2079 0.52 -0.1 126,755 + GFF2079 0.52 -0.9 126,756 - GFF2079 0.52 +1.0 126,756 - GFF2079 0.52 -0.4 126,823 + GFF2079 0.59 +0.3 126,823 + GFF2079 0.59 +0.0 126,823 + GFF2079 0.59 -0.8 126,824 - GFF2079 0.59 -0.8 126,824 - GFF2079 0.59 -0.6 126,824 - GFF2079 0.59 -1.5 126,902 + GFF2079 0.67 +0.1 126,903 - GFF2079 0.67 -0.1 126,903 - GFF2079 0.67 +0.7 126,903 - GFF2079 0.67 -0.1 126,903 - GFF2079 0.67 -1.0 126,953 + GFF2079 0.72 +1.0 126,954 - GFF2079 0.72 -0.6 126,981 - GFF2079 0.75 -0.9 127,027 + GFF2079 0.80 +0.9 128,109 + GFF2080 0.41 +0.8
Or see this region's nucleotide sequence