Experiment: M9 with calcium pantothenate 10 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF1836 and GFF1837 are separated by 107 nucleotides GFF1837 and GFF1838 are separated by 51 nucleotides
GFF1836 - Indolepyruvate oxidoreductase subunit IorA (EC 1.2.7.8), at 502,456 to 504,585
GFF1836
GFF1837 - Transcriptional regulator, LysR family, at 504,693 to 505,607
GFF1837
GFF1838 - Manganese transport protein MntH, at 505,659 to 506,912
GFF1838
Position (kb) 504
505
506 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 503.712 kb on - strand, within GFF1836 at 503.801 kb on + strand, within GFF1836 at 503.801 kb on + strand, within GFF1836 at 503.802 kb on - strand, within GFF1836 at 503.963 kb on + strand, within GFF1836 at 503.963 kb on + strand, within GFF1836 at 503.964 kb on - strand, within GFF1836 at 503.964 kb on - strand, within GFF1836 at 503.964 kb on - strand, within GFF1836 at 504.189 kb on - strand, within GFF1836 at 504.230 kb on + strand, within GFF1836 at 504.230 kb on + strand, within GFF1836 at 504.434 kb on + strand at 504.435 kb on - strand at 504.435 kb on - strand at 504.435 kb on - strand at 504.435 kb on - strand at 504.435 kb on - strand at 504.488 kb on + strand at 504.500 kb on + strand at 504.501 kb on - strand at 504.501 kb on - strand at 504.611 kb on + strand at 504.672 kb on - strand at 505.209 kb on + strand, within GFF1837 at 505.209 kb on + strand, within GFF1837 at 505.210 kb on - strand, within GFF1837 at 505.210 kb on - strand, within GFF1837 at 505.210 kb on - strand, within GFF1837 at 505.210 kb on - strand, within GFF1837 at 505.296 kb on + strand, within GFF1837 at 505.296 kb on + strand, within GFF1837 at 505.297 kb on - strand, within GFF1837 at 505.297 kb on - strand, within GFF1837 at 505.749 kb on + strand at 505.749 kb on + strand at 505.749 kb on + strand at 505.750 kb on - strand at 505.750 kb on - strand at 505.750 kb on - strand at 506.121 kb on + strand, within GFF1838 at 506.208 kb on + strand, within GFF1838 at 506.208 kb on + strand, within GFF1838 at 506.254 kb on - strand, within GFF1838 at 506.433 kb on + strand, within GFF1838 at 506.433 kb on + strand, within GFF1838 at 506.434 kb on - strand, within GFF1838 at 506.434 kb on - strand, within GFF1838 at 506.583 kb on + strand, within GFF1838 at 506.584 kb on - strand, within GFF1838 at 506.584 kb on - strand, within GFF1838 at 506.584 kb on - strand, within GFF1838
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with calcium pantothenate 10 mg/mL remove 503,712 - GFF1836 0.59 -0.3 503,801 + GFF1836 0.63 -1.0 503,801 + GFF1836 0.63 -0.3 503,802 - GFF1836 0.63 +0.1 503,963 + GFF1836 0.71 +0.8 503,963 + GFF1836 0.71 -0.2 503,964 - GFF1836 0.71 -0.5 503,964 - GFF1836 0.71 -1.5 503,964 - GFF1836 0.71 -0.2 504,189 - GFF1836 0.81 -0.6 504,230 + GFF1836 0.83 -0.2 504,230 + GFF1836 0.83 -1.2 504,434 + -1.6 504,435 - -0.7 504,435 - -0.6 504,435 - -0.3 504,435 - -0.3 504,435 - -0.1 504,488 + -0.0 504,500 + +0.5 504,501 - -1.0 504,501 - -1.0 504,611 + -2.0 504,672 - -1.0 505,209 + GFF1837 0.56 -0.0 505,209 + GFF1837 0.56 +0.1 505,210 - GFF1837 0.57 +1.8 505,210 - GFF1837 0.57 -0.8 505,210 - GFF1837 0.57 -1.4 505,210 - GFF1837 0.57 -0.8 505,296 + GFF1837 0.66 +0.3 505,296 + GFF1837 0.66 -1.1 505,297 - GFF1837 0.66 -0.1 505,297 - GFF1837 0.66 -1.0 505,749 + +0.2 505,749 + -0.3 505,749 + -1.0 505,750 - +3.4 505,750 - -0.6 505,750 - +1.3 506,121 + GFF1838 0.37 +0.0 506,208 + GFF1838 0.44 -0.2 506,208 + GFF1838 0.44 +0.1 506,254 - GFF1838 0.47 +0.5 506,433 + GFF1838 0.62 +0.8 506,433 + GFF1838 0.62 -0.8 506,434 - GFF1838 0.62 +0.0 506,434 - GFF1838 0.62 +0.5 506,583 + GFF1838 0.74 +1.0 506,584 - GFF1838 0.74 +0.5 506,584 - GFF1838 0.74 +0.1 506,584 - GFF1838 0.74 +0.1
Or see this region's nucleotide sequence