Experiment: M9 with calcium pantothenate 10 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF1666 and GFF1667 overlap by 4 nucleotides GFF1667 and GFF1668 are separated by 3 nucleotides
GFF1666 - N-methylhydantoinase A (EC 3.5.2.14), at 309,992 to 312,049
GFF1666
GFF1667 - N-methylhydantoinase B (EC 3.5.2.14), at 312,046 to 313,728
GFF1667
GFF1668 - BUG/TctC family periplasmic protein, at 313,732 to 314,700
GFF1668
Position (kb) 312
313
314 Strain fitness (log2 ratio) -2
-1
0
1 at 311.391 kb on + strand, within GFF1666 at 311.391 kb on + strand, within GFF1666 at 311.553 kb on + strand, within GFF1666 at 312.083 kb on + strand at 312.083 kb on + strand at 312.083 kb on + strand at 312.083 kb on + strand at 312.083 kb on + strand at 312.084 kb on - strand at 312.084 kb on - strand at 312.084 kb on - strand at 312.632 kb on + strand, within GFF1667 at 312.633 kb on - strand, within GFF1667 at 312.839 kb on + strand, within GFF1667 at 312.839 kb on + strand, within GFF1667 at 312.840 kb on - strand, within GFF1667 at 312.840 kb on - strand, within GFF1667 at 312.840 kb on - strand, within GFF1667 at 312.840 kb on - strand, within GFF1667 at 312.840 kb on - strand, within GFF1667 at 313.007 kb on + strand, within GFF1667 at 313.103 kb on + strand, within GFF1667 at 313.307 kb on + strand, within GFF1667 at 313.307 kb on + strand, within GFF1667 at 313.308 kb on - strand, within GFF1667 at 313.308 kb on - strand, within GFF1667 at 313.361 kb on + strand, within GFF1667 at 313.361 kb on + strand, within GFF1667 at 313.367 kb on + strand, within GFF1667 at 313.367 kb on + strand, within GFF1667 at 313.367 kb on + strand, within GFF1667 at 313.433 kb on + strand, within GFF1667 at 313.976 kb on + strand, within GFF1668 at 313.977 kb on - strand, within GFF1668 at 314.391 kb on - strand, within GFF1668
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with calcium pantothenate 10 mg/mL remove 311,391 + GFF1666 0.68 +0.2 311,391 + GFF1666 0.68 +0.1 311,553 + GFF1666 0.76 -1.4 312,083 + +0.0 312,083 + -0.5 312,083 + -0.2 312,083 + -0.9 312,083 + -1.7 312,084 - -0.6 312,084 - -1.0 312,084 - -0.3 312,632 + GFF1667 0.35 +0.1 312,633 - GFF1667 0.35 -0.6 312,839 + GFF1667 0.47 -0.7 312,839 + GFF1667 0.47 +0.1 312,840 - GFF1667 0.47 -1.6 312,840 - GFF1667 0.47 -0.7 312,840 - GFF1667 0.47 -0.9 312,840 - GFF1667 0.47 -0.8 312,840 - GFF1667 0.47 -0.5 313,007 + GFF1667 0.57 +1.3 313,103 + GFF1667 0.63 -0.7 313,307 + GFF1667 0.75 -0.8 313,307 + GFF1667 0.75 -0.2 313,308 - GFF1667 0.75 -0.9 313,308 - GFF1667 0.75 +0.3 313,361 + GFF1667 0.78 -2.4 313,361 + GFF1667 0.78 -0.1 313,367 + GFF1667 0.78 -1.1 313,367 + GFF1667 0.78 +0.9 313,367 + GFF1667 0.78 -0.4 313,433 + GFF1667 0.82 +0.3 313,976 + GFF1668 0.25 -0.3 313,977 - GFF1668 0.25 +0.2 314,391 - GFF1668 0.68 +0.9
Or see this region's nucleotide sequence