Experiment: M9 with calcium pantothenate 10 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF1387 and GFF1388 overlap by 4 nucleotides GFF1388 and GFF1389 overlap by 4 nucleotides GFF1389 and GFF1390 overlap by 4 nucleotides GFF1390 and GFF1391 are separated by 137 nucleotides
GFF1387 - Paraquat-inducible protein A, at 734,137 to 734,763
GFF1387
GFF1388 - Paraquat-inducible protein A, at 734,760 to 735,506
GFF1388
GFF1389 - Paraquat-inducible protein B, at 735,503 to 737,149
GFF1389
GFF1390 - ortholog of Bordetella pertussis (BX470248) BP2750, at 737,146 to 737,775
GFF1390
GFF1391 - Uncharacterized MFS-type transporter, at 737,913 to 739,493
GFF1391
Position (kb) 735
736
737
738 Strain fitness (log2 ratio) -2
-1
0
1
2 at 735.003 kb on + strand, within GFF1388 at 735.003 kb on + strand, within GFF1388 at 735.003 kb on + strand, within GFF1388 at 735.003 kb on + strand, within GFF1388 at 735.003 kb on + strand, within GFF1388 at 735.003 kb on + strand, within GFF1388 at 735.003 kb on + strand, within GFF1388 at 735.003 kb on + strand, within GFF1388 at 735.003 kb on + strand, within GFF1388 at 735.003 kb on + strand, within GFF1388 at 735.003 kb on + strand, within GFF1388 at 735.003 kb on + strand, within GFF1388 at 735.003 kb on + strand, within GFF1388 at 735.003 kb on + strand, within GFF1388 at 735.003 kb on + strand, within GFF1388 at 735.003 kb on + strand, within GFF1388 at 735.003 kb on + strand, within GFF1388 at 735.003 kb on + strand, within GFF1388 at 735.003 kb on + strand, within GFF1388 at 735.003 kb on + strand, within GFF1388 at 735.003 kb on + strand, within GFF1388 at 735.003 kb on + strand, within GFF1388 at 735.004 kb on - strand, within GFF1388 at 735.004 kb on - strand, within GFF1388 at 735.004 kb on - strand, within GFF1388 at 735.004 kb on - strand, within GFF1388 at 735.004 kb on - strand, within GFF1388 at 735.004 kb on - strand, within GFF1388 at 735.004 kb on - strand, within GFF1388 at 735.004 kb on - strand, within GFF1388 at 735.004 kb on - strand, within GFF1388 at 735.004 kb on - strand, within GFF1388 at 735.004 kb on - strand, within GFF1388 at 735.004 kb on - strand, within GFF1388 at 735.004 kb on - strand, within GFF1388 at 735.004 kb on - strand, within GFF1388 at 735.004 kb on - strand, within GFF1388 at 735.007 kb on + strand, within GFF1388 at 735.008 kb on - strand, within GFF1388 at 735.060 kb on + strand, within GFF1388 at 735.061 kb on - strand, within GFF1388 at 735.061 kb on - strand, within GFF1388 at 735.061 kb on - strand, within GFF1388 at 735.087 kb on + strand, within GFF1388 at 735.088 kb on - strand, within GFF1388 at 735.088 kb on - strand, within GFF1388 at 735.088 kb on - strand, within GFF1388 at 735.088 kb on - strand, within GFF1388 at 735.109 kb on - strand, within GFF1388 at 735.237 kb on + strand, within GFF1388 at 735.238 kb on - strand, within GFF1388 at 735.735 kb on - strand, within GFF1389 at 735.735 kb on - strand, within GFF1389 at 735.735 kb on - strand, within GFF1389 at 735.735 kb on - strand, within GFF1389 at 735.795 kb on + strand, within GFF1389 at 735.795 kb on + strand, within GFF1389 at 735.795 kb on + strand, within GFF1389 at 735.796 kb on - strand, within GFF1389 at 735.923 kb on + strand, within GFF1389 at 735.923 kb on + strand, within GFF1389 at 735.923 kb on + strand, within GFF1389 at 735.923 kb on + strand, within GFF1389 at 735.924 kb on - strand, within GFF1389 at 735.924 kb on - strand, within GFF1389 at 735.924 kb on - strand, within GFF1389 at 736.073 kb on + strand, within GFF1389 at 736.073 kb on + strand, within GFF1389 at 736.074 kb on - strand, within GFF1389 at 736.074 kb on - strand, within GFF1389 at 736.166 kb on + strand, within GFF1389 at 736.166 kb on + strand, within GFF1389 at 736.166 kb on + strand, within GFF1389 at 736.412 kb on + strand, within GFF1389 at 736.412 kb on + strand, within GFF1389 at 736.413 kb on - strand, within GFF1389 at 736.413 kb on - strand, within GFF1389 at 736.694 kb on + strand, within GFF1389 at 736.694 kb on + strand, within GFF1389 at 736.694 kb on + strand, within GFF1389 at 736.694 kb on + strand, within GFF1389 at 736.695 kb on - strand, within GFF1389 at 736.695 kb on - strand, within GFF1389 at 736.695 kb on - strand, within GFF1389 at 737.093 kb on + strand at 737.093 kb on + strand at 737.094 kb on - strand at 737.094 kb on - strand at 737.227 kb on + strand, within GFF1390 at 737.227 kb on + strand, within GFF1390 at 737.227 kb on + strand, within GFF1390 at 737.227 kb on + strand, within GFF1390 at 737.227 kb on + strand, within GFF1390 at 737.227 kb on + strand, within GFF1390 at 737.228 kb on - strand, within GFF1390 at 737.228 kb on - strand, within GFF1390 at 737.228 kb on - strand, within GFF1390 at 737.228 kb on - strand, within GFF1390 at 737.230 kb on + strand, within GFF1390 at 737.230 kb on + strand, within GFF1390 at 737.230 kb on + strand, within GFF1390 at 737.230 kb on + strand, within GFF1390 at 737.231 kb on - strand, within GFF1390 at 737.299 kb on + strand, within GFF1390 at 737.299 kb on + strand, within GFF1390 at 737.848 kb on - strand at 737.848 kb on - strand at 737.848 kb on - strand at 738.138 kb on + strand, within GFF1391 at 738.138 kb on + strand, within GFF1391 at 738.139 kb on - strand, within GFF1391 at 738.139 kb on - strand, within GFF1391 at 738.139 kb on - strand, within GFF1391
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with calcium pantothenate 10 mg/mL remove 735,003 + GFF1388 0.33 +0.4 735,003 + GFF1388 0.33 +0.3 735,003 + GFF1388 0.33 -0.4 735,003 + GFF1388 0.33 +0.9 735,003 + GFF1388 0.33 -1.1 735,003 + GFF1388 0.33 +0.2 735,003 + GFF1388 0.33 +0.2 735,003 + GFF1388 0.33 -2.0 735,003 + GFF1388 0.33 -0.0 735,003 + GFF1388 0.33 +0.4 735,003 + GFF1388 0.33 -0.2 735,003 + GFF1388 0.33 -0.8 735,003 + GFF1388 0.33 -1.4 735,003 + GFF1388 0.33 -0.3 735,003 + GFF1388 0.33 +0.7 735,003 + GFF1388 0.33 +0.2 735,003 + GFF1388 0.33 +0.6 735,003 + GFF1388 0.33 -1.5 735,003 + GFF1388 0.33 +0.8 735,003 + GFF1388 0.33 -0.2 735,003 + GFF1388 0.33 +0.1 735,003 + GFF1388 0.33 +0.4 735,004 - GFF1388 0.33 -0.5 735,004 - GFF1388 0.33 +0.1 735,004 - GFF1388 0.33 +0.3 735,004 - GFF1388 0.33 +0.0 735,004 - GFF1388 0.33 +0.1 735,004 - GFF1388 0.33 -0.6 735,004 - GFF1388 0.33 -0.2 735,004 - GFF1388 0.33 -0.9 735,004 - GFF1388 0.33 -1.2 735,004 - GFF1388 0.33 +0.2 735,004 - GFF1388 0.33 -0.6 735,004 - GFF1388 0.33 -0.3 735,004 - GFF1388 0.33 +0.8 735,004 - GFF1388 0.33 +0.7 735,004 - GFF1388 0.33 -0.2 735,007 + GFF1388 0.33 -0.2 735,008 - GFF1388 0.33 -1.3 735,060 + GFF1388 0.40 +0.4 735,061 - GFF1388 0.40 -0.1 735,061 - GFF1388 0.40 +0.2 735,061 - GFF1388 0.40 -0.8 735,087 + GFF1388 0.44 +0.2 735,088 - GFF1388 0.44 -1.9 735,088 - GFF1388 0.44 -2.2 735,088 - GFF1388 0.44 -0.2 735,088 - GFF1388 0.44 +0.4 735,109 - GFF1388 0.47 +0.1 735,237 + GFF1388 0.64 +0.9 735,238 - GFF1388 0.64 -0.2 735,735 - GFF1389 0.14 -0.8 735,735 - GFF1389 0.14 +0.2 735,735 - GFF1389 0.14 -0.2 735,735 - GFF1389 0.14 -2.4 735,795 + GFF1389 0.18 -0.0 735,795 + GFF1389 0.18 +0.3 735,795 + GFF1389 0.18 +0.3 735,796 - GFF1389 0.18 -0.3 735,923 + GFF1389 0.26 -0.5 735,923 + GFF1389 0.26 +0.6 735,923 + GFF1389 0.26 -1.8 735,923 + GFF1389 0.26 -0.9 735,924 - GFF1389 0.26 +2.4 735,924 - GFF1389 0.26 -0.2 735,924 - GFF1389 0.26 -1.2 736,073 + GFF1389 0.35 -0.9 736,073 + GFF1389 0.35 +0.6 736,074 - GFF1389 0.35 +0.3 736,074 - GFF1389 0.35 +0.3 736,166 + GFF1389 0.40 +0.2 736,166 + GFF1389 0.40 +0.1 736,166 + GFF1389 0.40 +0.4 736,412 + GFF1389 0.55 +0.4 736,412 + GFF1389 0.55 -0.7 736,413 - GFF1389 0.55 -0.4 736,413 - GFF1389 0.55 +0.1 736,694 + GFF1389 0.72 -0.9 736,694 + GFF1389 0.72 +0.6 736,694 + GFF1389 0.72 +0.1 736,694 + GFF1389 0.72 -0.7 736,695 - GFF1389 0.72 -0.2 736,695 - GFF1389 0.72 -0.8 736,695 - GFF1389 0.72 -0.6 737,093 + -1.4 737,093 + -0.6 737,094 - +0.4 737,094 - -0.2 737,227 + GFF1390 0.13 -1.2 737,227 + GFF1390 0.13 -0.2 737,227 + GFF1390 0.13 -0.1 737,227 + GFF1390 0.13 -0.6 737,227 + GFF1390 0.13 -1.8 737,227 + GFF1390 0.13 -1.2 737,228 - GFF1390 0.13 +0.4 737,228 - GFF1390 0.13 +0.6 737,228 - GFF1390 0.13 -1.7 737,228 - GFF1390 0.13 -0.6 737,230 + GFF1390 0.13 +0.4 737,230 + GFF1390 0.13 -0.1 737,230 + GFF1390 0.13 -1.2 737,230 + GFF1390 0.13 -1.2 737,231 - GFF1390 0.13 -0.0 737,299 + GFF1390 0.24 +2.2 737,299 + GFF1390 0.24 -0.9 737,848 - -0.6 737,848 - +0.1 737,848 - -0.2 738,138 + GFF1391 0.14 +0.2 738,138 + GFF1391 0.14 +0.1 738,139 - GFF1391 0.14 -0.3 738,139 - GFF1391 0.14 +0.7 738,139 - GFF1391 0.14 -2.2
Or see this region's nucleotide sequence