Experiment: M9 with calcium pantothenate 10 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF1316 and GFF1317 overlap by 4 nucleotides GFF1317 and GFF1318 are separated by 2 nucleotides GFF1318 and GFF1319 overlap by 4 nucleotides
GFF1316 - Cellulose synthase catalytic subunit [UDP-forming] (EC 2.4.1.12), at 651,266 to 653,428
GFF1316
GFF1317 - no description, at 653,425 to 654,222
GFF1317
GFF1318 - hypothetical protein, at 654,225 to 654,722
GFF1318
GFF1319 - no description, at 654,719 to 655,192
GFF1319
Position (kb) 653
654
655 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 652.563 kb on + strand, within GFF1316 at 652.563 kb on + strand, within GFF1316 at 652.563 kb on + strand, within GFF1316 at 652.563 kb on + strand, within GFF1316 at 652.563 kb on + strand, within GFF1316 at 652.563 kb on + strand, within GFF1316 at 652.563 kb on + strand, within GFF1316 at 652.564 kb on - strand, within GFF1316 at 652.564 kb on - strand, within GFF1316 at 652.564 kb on - strand, within GFF1316 at 652.564 kb on - strand, within GFF1316 at 652.564 kb on - strand, within GFF1316 at 652.564 kb on - strand, within GFF1316 at 652.564 kb on - strand, within GFF1316 at 652.595 kb on + strand, within GFF1316 at 652.638 kb on + strand, within GFF1316 at 652.638 kb on + strand, within GFF1316 at 652.638 kb on + strand, within GFF1316 at 652.638 kb on + strand, within GFF1316 at 652.638 kb on + strand, within GFF1316 at 652.639 kb on - strand, within GFF1316 at 652.639 kb on - strand, within GFF1316 at 652.639 kb on - strand, within GFF1316 at 652.965 kb on + strand, within GFF1316 at 652.965 kb on + strand, within GFF1316 at 652.965 kb on + strand, within GFF1316 at 652.965 kb on + strand, within GFF1316 at 652.965 kb on + strand, within GFF1316 at 652.965 kb on + strand, within GFF1316 at 652.965 kb on + strand, within GFF1316 at 652.965 kb on + strand, within GFF1316 at 652.965 kb on + strand, within GFF1316 at 652.966 kb on - strand, within GFF1316 at 652.966 kb on - strand, within GFF1316 at 652.966 kb on - strand, within GFF1316 at 652.966 kb on - strand, within GFF1316 at 652.966 kb on - strand, within GFF1316 at 652.966 kb on - strand, within GFF1316 at 653.058 kb on + strand, within GFF1316 at 653.058 kb on + strand, within GFF1316 at 653.058 kb on + strand, within GFF1316 at 653.058 kb on + strand, within GFF1316 at 653.058 kb on + strand, within GFF1316 at 653.058 kb on + strand, within GFF1316 at 653.058 kb on + strand, within GFF1316 at 653.058 kb on + strand, within GFF1316 at 653.058 kb on + strand, within GFF1316 at 653.059 kb on - strand, within GFF1316 at 653.059 kb on - strand, within GFF1316 at 653.059 kb on - strand, within GFF1316 at 653.059 kb on - strand, within GFF1316 at 653.059 kb on - strand, within GFF1316 at 653.059 kb on - strand, within GFF1316 at 653.059 kb on - strand, within GFF1316 at 653.085 kb on + strand, within GFF1316 at 653.085 kb on + strand, within GFF1316 at 653.086 kb on - strand, within GFF1316 at 653.086 kb on - strand, within GFF1316 at 653.086 kb on - strand, within GFF1316 at 653.086 kb on - strand, within GFF1316 at 653.086 kb on - strand, within GFF1316 at 653.086 kb on - strand, within GFF1316 at 653.086 kb on - strand, within GFF1316 at 653.166 kb on + strand, within GFF1316 at 653.166 kb on + strand, within GFF1316 at 653.166 kb on + strand, within GFF1316 at 653.166 kb on + strand, within GFF1316 at 653.166 kb on + strand, within GFF1316 at 653.166 kb on + strand, within GFF1316 at 653.166 kb on + strand, within GFF1316 at 653.166 kb on + strand, within GFF1316 at 653.167 kb on - strand, within GFF1316 at 653.167 kb on - strand, within GFF1316 at 653.167 kb on - strand, within GFF1316 at 653.167 kb on - strand, within GFF1316 at 653.167 kb on - strand, within GFF1316 at 653.167 kb on - strand, within GFF1316 at 653.167 kb on - strand, within GFF1316 at 653.172 kb on + strand, within GFF1316 at 653.172 kb on + strand, within GFF1316 at 653.172 kb on + strand, within GFF1316 at 653.172 kb on + strand, within GFF1316 at 653.172 kb on + strand, within GFF1316 at 653.173 kb on - strand, within GFF1316 at 653.173 kb on - strand, within GFF1316 at 653.535 kb on - strand, within GFF1317 at 653.684 kb on + strand, within GFF1317 at 653.684 kb on + strand, within GFF1317 at 653.684 kb on + strand, within GFF1317 at 653.684 kb on + strand, within GFF1317 at 653.684 kb on + strand, within GFF1317 at 653.684 kb on + strand, within GFF1317 at 653.685 kb on - strand, within GFF1317 at 653.685 kb on - strand, within GFF1317 at 653.685 kb on - strand, within GFF1317 at 653.685 kb on - strand, within GFF1317 at 653.685 kb on - strand, within GFF1317 at 653.699 kb on + strand, within GFF1317 at 653.699 kb on + strand, within GFF1317 at 653.700 kb on - strand, within GFF1317 at 653.720 kb on + strand, within GFF1317 at 653.720 kb on + strand, within GFF1317 at 653.720 kb on + strand, within GFF1317 at 653.720 kb on + strand, within GFF1317 at 653.720 kb on + strand, within GFF1317 at 653.720 kb on + strand, within GFF1317 at 653.720 kb on + strand, within GFF1317 at 653.720 kb on + strand, within GFF1317 at 653.720 kb on + strand, within GFF1317 at 653.720 kb on + strand, within GFF1317 at 653.720 kb on + strand, within GFF1317 at 653.721 kb on - strand, within GFF1317 at 653.721 kb on - strand, within GFF1317 at 653.721 kb on - strand, within GFF1317 at 653.721 kb on - strand, within GFF1317 at 653.721 kb on - strand, within GFF1317 at 653.721 kb on - strand, within GFF1317 at 653.721 kb on - strand, within GFF1317 at 653.721 kb on - strand, within GFF1317 at 653.721 kb on - strand, within GFF1317 at 653.721 kb on - strand, within GFF1317 at 653.721 kb on - strand, within GFF1317 at 653.721 kb on - strand, within GFF1317 at 653.721 kb on - strand, within GFF1317 at 653.721 kb on - strand, within GFF1317 at 653.721 kb on - strand, within GFF1317 at 653.721 kb on - strand, within GFF1317 at 653.721 kb on - strand, within GFF1317 at 653.825 kb on + strand, within GFF1317 at 653.825 kb on + strand, within GFF1317 at 653.826 kb on - strand, within GFF1317 at 653.826 kb on - strand, within GFF1317 at 653.826 kb on - strand, within GFF1317 at 653.826 kb on - strand, within GFF1317 at 653.826 kb on - strand, within GFF1317 at 654.184 kb on + strand at 654.184 kb on + strand at 654.184 kb on + strand at 654.184 kb on + strand at 654.184 kb on + strand at 654.184 kb on + strand at 654.185 kb on - strand at 654.185 kb on - strand at 654.185 kb on - strand at 654.185 kb on - strand at 654.185 kb on - strand at 654.185 kb on - strand at 654.649 kb on + strand, within GFF1318 at 654.649 kb on + strand, within GFF1318 at 654.649 kb on + strand, within GFF1318 at 654.649 kb on + strand, within GFF1318 at 654.649 kb on + strand, within GFF1318 at 654.650 kb on - strand, within GFF1318 at 654.650 kb on - strand, within GFF1318 at 654.650 kb on - strand, within GFF1318 at 654.650 kb on - strand, within GFF1318 at 654.650 kb on - strand, within GFF1318 at 654.751 kb on + strand at 654.752 kb on - strand at 654.834 kb on + strand, within GFF1319 at 654.834 kb on + strand, within GFF1319 at 654.834 kb on + strand, within GFF1319 at 654.834 kb on + strand, within GFF1319 at 654.834 kb on + strand, within GFF1319 at 654.834 kb on + strand, within GFF1319 at 654.834 kb on + strand, within GFF1319 at 654.834 kb on + strand, within GFF1319 at 654.834 kb on + strand, within GFF1319 at 654.834 kb on + strand, within GFF1319 at 654.834 kb on + strand, within GFF1319 at 654.834 kb on + strand, within GFF1319 at 654.834 kb on + strand, within GFF1319 at 654.834 kb on + strand, within GFF1319 at 654.834 kb on + strand, within GFF1319 at 654.835 kb on - strand, within GFF1319 at 654.835 kb on - strand, within GFF1319 at 654.835 kb on - strand, within GFF1319 at 654.835 kb on - strand, within GFF1319 at 654.835 kb on - strand, within GFF1319 at 654.835 kb on - strand, within GFF1319 at 654.835 kb on - strand, within GFF1319 at 654.835 kb on - strand, within GFF1319 at 654.835 kb on - strand, within GFF1319 at 654.835 kb on - strand, within GFF1319 at 654.835 kb on - strand, within GFF1319 at 654.835 kb on - strand, within GFF1319 at 654.835 kb on - strand, within GFF1319 at 654.835 kb on - strand, within GFF1319 at 654.835 kb on - strand, within GFF1319 at 655.012 kb on + strand, within GFF1319 at 655.012 kb on + strand, within GFF1319 at 655.012 kb on + strand, within GFF1319 at 655.012 kb on + strand, within GFF1319 at 655.012 kb on + strand, within GFF1319 at 655.012 kb on + strand, within GFF1319 at 655.012 kb on + strand, within GFF1319 at 655.013 kb on - strand, within GFF1319 at 655.013 kb on - strand, within GFF1319 at 655.013 kb on - strand, within GFF1319 at 655.013 kb on - strand, within GFF1319 at 655.013 kb on - strand, within GFF1319 at 655.013 kb on - strand, within GFF1319 at 655.013 kb on - strand, within GFF1319 at 655.013 kb on - strand, within GFF1319 at 655.124 kb on + strand, within GFF1319 at 655.161 kb on + strand at 655.161 kb on + strand at 655.161 kb on + strand at 655.161 kb on + strand at 655.161 kb on + strand at 655.161 kb on + strand at 655.162 kb on - strand at 655.162 kb on - strand at 655.162 kb on - strand at 655.162 kb on - strand at 655.162 kb on - strand at 655.162 kb on - strand at 655.162 kb on - strand at 655.164 kb on + strand at 655.164 kb on + strand at 655.164 kb on + strand at 655.164 kb on + strand at 655.164 kb on + strand at 655.164 kb on + strand at 655.164 kb on + strand at 655.165 kb on - strand at 655.165 kb on - strand at 655.165 kb on - strand at 655.165 kb on - strand at 655.166 kb on - strand at 655.171 kb on + strand at 655.171 kb on + strand at 655.171 kb on + strand at 655.171 kb on + strand at 655.172 kb on - strand at 655.172 kb on - strand at 655.172 kb on - strand at 655.188 kb on + strand at 655.188 kb on + strand at 655.218 kb on - strand at 655.218 kb on - strand at 655.218 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with calcium pantothenate 10 mg/mL remove 652,563 + GFF1316 0.60 -0.8 652,563 + GFF1316 0.60 -0.8 652,563 + GFF1316 0.60 +0.6 652,563 + GFF1316 0.60 -0.6 652,563 + GFF1316 0.60 +0.5 652,563 + GFF1316 0.60 +0.9 652,563 + GFF1316 0.60 -0.5 652,564 - GFF1316 0.60 -0.2 652,564 - GFF1316 0.60 -1.2 652,564 - GFF1316 0.60 -1.5 652,564 - GFF1316 0.60 -0.2 652,564 - GFF1316 0.60 +0.4 652,564 - GFF1316 0.60 +3.0 652,564 - GFF1316 0.60 +0.1 652,595 + GFF1316 0.61 -1.0 652,638 + GFF1316 0.63 +0.4 652,638 + GFF1316 0.63 -0.8 652,638 + GFF1316 0.63 -0.4 652,638 + GFF1316 0.63 -0.4 652,638 + GFF1316 0.63 -0.3 652,639 - GFF1316 0.63 -0.6 652,639 - GFF1316 0.63 -0.2 652,639 - GFF1316 0.63 -2.0 652,965 + GFF1316 0.79 +1.4 652,965 + GFF1316 0.79 -0.3 652,965 + GFF1316 0.79 +0.3 652,965 + GFF1316 0.79 -0.4 652,965 + GFF1316 0.79 -0.5 652,965 + GFF1316 0.79 -0.3 652,965 + GFF1316 0.79 -1.1 652,965 + GFF1316 0.79 +0.4 652,965 + GFF1316 0.79 -0.2 652,966 - GFF1316 0.79 -0.4 652,966 - GFF1316 0.79 -0.8 652,966 - GFF1316 0.79 -0.3 652,966 - GFF1316 0.79 -0.5 652,966 - GFF1316 0.79 -0.5 652,966 - GFF1316 0.79 -1.0 653,058 + GFF1316 0.83 +0.9 653,058 + GFF1316 0.83 -0.1 653,058 + GFF1316 0.83 -0.6 653,058 + GFF1316 0.83 +1.4 653,058 + GFF1316 0.83 +0.2 653,058 + GFF1316 0.83 -1.0 653,058 + GFF1316 0.83 +0.2 653,058 + GFF1316 0.83 -0.4 653,058 + GFF1316 0.83 -1.5 653,059 - GFF1316 0.83 -1.2 653,059 - GFF1316 0.83 +0.1 653,059 - GFF1316 0.83 -0.8 653,059 - GFF1316 0.83 -1.8 653,059 - GFF1316 0.83 -0.8 653,059 - GFF1316 0.83 +0.6 653,059 - GFF1316 0.83 -0.8 653,085 + GFF1316 0.84 -0.5 653,085 + GFF1316 0.84 +0.1 653,086 - GFF1316 0.84 -1.6 653,086 - GFF1316 0.84 -0.1 653,086 - GFF1316 0.84 -0.1 653,086 - GFF1316 0.84 -0.0 653,086 - GFF1316 0.84 -0.6 653,086 - GFF1316 0.84 +1.4 653,086 - GFF1316 0.84 +0.8 653,166 + GFF1316 0.88 -0.9 653,166 + GFF1316 0.88 +1.4 653,166 + GFF1316 0.88 +1.4 653,166 + GFF1316 0.88 +0.8 653,166 + GFF1316 0.88 -1.2 653,166 + GFF1316 0.88 -1.8 653,166 + GFF1316 0.88 +1.4 653,166 + GFF1316 0.88 +0.0 653,167 - GFF1316 0.88 +0.9 653,167 - GFF1316 0.88 +0.1 653,167 - GFF1316 0.88 -0.9 653,167 - GFF1316 0.88 +0.1 653,167 - GFF1316 0.88 -0.0 653,167 - GFF1316 0.88 -0.2 653,167 - GFF1316 0.88 -0.5 653,172 + GFF1316 0.88 -2.4 653,172 + GFF1316 0.88 +0.1 653,172 + GFF1316 0.88 -0.4 653,172 + GFF1316 0.88 +0.2 653,172 + GFF1316 0.88 +0.4 653,173 - GFF1316 0.88 -0.0 653,173 - GFF1316 0.88 -1.7 653,535 - GFF1317 0.14 -0.8 653,684 + GFF1317 0.32 +0.7 653,684 + GFF1317 0.32 -1.0 653,684 + GFF1317 0.32 +0.1 653,684 + GFF1317 0.32 -1.0 653,684 + GFF1317 0.32 +2.4 653,684 + GFF1317 0.32 -0.4 653,685 - GFF1317 0.33 -0.6 653,685 - GFF1317 0.33 +0.8 653,685 - GFF1317 0.33 -0.1 653,685 - GFF1317 0.33 -1.8 653,685 - GFF1317 0.33 +0.9 653,699 + GFF1317 0.34 -0.0 653,699 + GFF1317 0.34 -0.2 653,700 - GFF1317 0.34 +0.2 653,720 + GFF1317 0.37 -0.6 653,720 + GFF1317 0.37 +0.4 653,720 + GFF1317 0.37 +1.0 653,720 + GFF1317 0.37 +0.2 653,720 + GFF1317 0.37 -1.6 653,720 + GFF1317 0.37 +1.0 653,720 + GFF1317 0.37 -0.3 653,720 + GFF1317 0.37 +1.0 653,720 + GFF1317 0.37 -1.2 653,720 + GFF1317 0.37 -0.2 653,720 + GFF1317 0.37 -0.8 653,721 - GFF1317 0.37 -0.1 653,721 - GFF1317 0.37 -0.7 653,721 - GFF1317 0.37 +0.6 653,721 - GFF1317 0.37 +0.2 653,721 - GFF1317 0.37 +0.2 653,721 - GFF1317 0.37 +0.3 653,721 - GFF1317 0.37 -0.6 653,721 - GFF1317 0.37 -0.3 653,721 - GFF1317 0.37 +2.3 653,721 - GFF1317 0.37 +0.0 653,721 - GFF1317 0.37 -0.9 653,721 - GFF1317 0.37 +2.0 653,721 - GFF1317 0.37 +0.1 653,721 - GFF1317 0.37 +0.4 653,721 - GFF1317 0.37 -0.7 653,721 - GFF1317 0.37 -1.3 653,721 - GFF1317 0.37 -0.3 653,825 + GFF1317 0.50 +0.2 653,825 + GFF1317 0.50 +0.8 653,826 - GFF1317 0.50 +0.9 653,826 - GFF1317 0.50 -1.8 653,826 - GFF1317 0.50 +1.4 653,826 - GFF1317 0.50 -1.2 653,826 - GFF1317 0.50 +0.0 654,184 + -0.5 654,184 + -0.6 654,184 + +0.2 654,184 + -0.8 654,184 + -0.8 654,184 + -2.2 654,185 - -1.0 654,185 - -0.6 654,185 - -0.4 654,185 - +0.1 654,185 - -0.8 654,185 - +1.8 654,649 + GFF1318 0.85 -0.9 654,649 + GFF1318 0.85 -0.5 654,649 + GFF1318 0.85 +1.1 654,649 + GFF1318 0.85 -1.3 654,649 + GFF1318 0.85 -0.6 654,650 - GFF1318 0.85 +0.5 654,650 - GFF1318 0.85 -0.3 654,650 - GFF1318 0.85 -0.7 654,650 - GFF1318 0.85 -1.5 654,650 - GFF1318 0.85 -0.7 654,751 + -0.2 654,752 - -1.4 654,834 + GFF1319 0.24 -0.3 654,834 + GFF1319 0.24 -1.4 654,834 + GFF1319 0.24 -0.5 654,834 + GFF1319 0.24 -0.5 654,834 + GFF1319 0.24 -0.7 654,834 + GFF1319 0.24 +0.4 654,834 + GFF1319 0.24 -1.4 654,834 + GFF1319 0.24 -0.6 654,834 + GFF1319 0.24 -0.9 654,834 + GFF1319 0.24 +0.2 654,834 + GFF1319 0.24 -0.6 654,834 + GFF1319 0.24 -1.4 654,834 + GFF1319 0.24 +0.1 654,834 + GFF1319 0.24 -0.7 654,834 + GFF1319 0.24 -0.2 654,835 - GFF1319 0.24 +0.6 654,835 - GFF1319 0.24 +0.6 654,835 - GFF1319 0.24 -1.6 654,835 - GFF1319 0.24 -0.3 654,835 - GFF1319 0.24 -0.2 654,835 - GFF1319 0.24 -0.6 654,835 - GFF1319 0.24 +1.2 654,835 - GFF1319 0.24 -0.6 654,835 - GFF1319 0.24 +2.4 654,835 - GFF1319 0.24 +0.9 654,835 - GFF1319 0.24 +3.7 654,835 - GFF1319 0.24 -0.2 654,835 - GFF1319 0.24 -0.2 654,835 - GFF1319 0.24 +0.0 654,835 - GFF1319 0.24 -0.6 655,012 + GFF1319 0.62 +0.1 655,012 + GFF1319 0.62 -0.6 655,012 + GFF1319 0.62 -0.9 655,012 + GFF1319 0.62 -0.1 655,012 + GFF1319 0.62 +0.5 655,012 + GFF1319 0.62 -0.4 655,012 + GFF1319 0.62 -1.8 655,013 - GFF1319 0.62 -0.4 655,013 - GFF1319 0.62 -0.5 655,013 - GFF1319 0.62 -0.5 655,013 - GFF1319 0.62 -1.0 655,013 - GFF1319 0.62 +0.8 655,013 - GFF1319 0.62 +0.7 655,013 - GFF1319 0.62 -0.9 655,013 - GFF1319 0.62 +0.1 655,124 + GFF1319 0.85 -0.0 655,161 + -0.6 655,161 + -0.5 655,161 + +1.6 655,161 + -0.8 655,161 + +0.1 655,161 + -0.9 655,162 - -0.6 655,162 - -0.6 655,162 - -0.2 655,162 - +0.1 655,162 - +1.2 655,162 - +0.9 655,162 - +1.6 655,164 + -0.1 655,164 + +0.4 655,164 + -2.0 655,164 + -0.5 655,164 + +0.2 655,164 + -0.2 655,164 + -0.2 655,165 - -0.2 655,165 - -0.6 655,165 - -0.5 655,165 - -0.9 655,166 - +1.2 655,171 + -0.4 655,171 + -0.4 655,171 + -2.6 655,171 + +0.4 655,172 - +0.3 655,172 - +0.7 655,172 - -0.6 655,188 + +0.3 655,188 + +0.6 655,218 - -1.3 655,218 - -0.8 655,218 - -1.0
Or see this region's nucleotide sequence