Experiment: M9 with calcium pantothenate 10 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF1155 and GFF1156 are separated by 16 nucleotides GFF1156 and GFF1157 overlap by 4 nucleotides GFF1157 and GFF1158 are separated by 281 nucleotides
GFF1155 - Putative transmembrane protein, at 471,162 to 471,986
GFF1155
GFF1156 - Putative transmembrane protein, at 472,003 to 472,425
GFF1156
GFF1157 - DNA-directed RNA polymerase specialized sigma subunit, sigma24-like, at 472,422 to 472,988
GFF1157
GFF1158 - Acetolactate synthase large subunit (EC 2.2.1.6), at 473,270 to 475,054
GFF1158
Position (kb) 472
473 Strain fitness (log2 ratio) -2
-1
0
1 at 471.526 kb on + strand, within GFF1155 at 471.526 kb on + strand, within GFF1155 at 471.526 kb on + strand, within GFF1155 at 471.527 kb on - strand, within GFF1155 at 471.527 kb on - strand, within GFF1155 at 471.527 kb on - strand, within GFF1155 at 471.527 kb on - strand, within GFF1155 at 471.527 kb on - strand, within GFF1155 at 471.679 kb on + strand, within GFF1155 at 471.679 kb on + strand, within GFF1155 at 471.679 kb on + strand, within GFF1155 at 471.680 kb on - strand, within GFF1155 at 471.680 kb on - strand, within GFF1155 at 471.680 kb on - strand, within GFF1155 at 471.680 kb on - strand, within GFF1155 at 471.956 kb on + strand at 471.956 kb on + strand at 471.956 kb on + strand at 471.956 kb on + strand at 471.956 kb on + strand at 471.956 kb on + strand at 471.956 kb on + strand at 471.957 kb on - strand at 471.957 kb on - strand at 471.957 kb on - strand at 471.957 kb on - strand at 472.053 kb on + strand, within GFF1156 at 472.054 kb on - strand, within GFF1156 at 472.054 kb on - strand, within GFF1156 at 472.135 kb on + strand, within GFF1156 at 472.135 kb on + strand, within GFF1156 at 472.135 kb on + strand, within GFF1156 at 472.136 kb on - strand, within GFF1156 at 472.136 kb on - strand, within GFF1156 at 472.136 kb on - strand, within GFF1156 at 472.416 kb on + strand at 472.417 kb on - strand at 472.417 kb on - strand at 472.417 kb on - strand at 472.417 kb on - strand at 472.417 kb on - strand at 472.417 kb on - strand at 472.417 kb on - strand at 472.417 kb on - strand at 472.417 kb on - strand at 472.417 kb on - strand at 472.419 kb on + strand at 472.419 kb on + strand at 472.419 kb on + strand at 472.419 kb on + strand at 472.419 kb on + strand at 472.420 kb on - strand at 472.420 kb on - strand at 472.420 kb on - strand at 472.420 kb on - strand at 472.420 kb on - strand at 472.420 kb on - strand at 472.425 kb on + strand at 472.425 kb on + strand at 472.425 kb on + strand at 472.431 kb on + strand at 472.431 kb on + strand at 472.553 kb on - strand, within GFF1157 at 472.553 kb on - strand, within GFF1157 at 472.664 kb on + strand, within GFF1157 at 472.665 kb on - strand, within GFF1157 at 472.849 kb on + strand, within GFF1157 at 472.849 kb on + strand, within GFF1157 at 472.849 kb on + strand, within GFF1157 at 472.850 kb on - strand, within GFF1157 at 472.886 kb on + strand, within GFF1157 at 472.918 kb on + strand, within GFF1157 at 472.918 kb on + strand, within GFF1157 at 472.918 kb on + strand, within GFF1157 at 472.918 kb on + strand, within GFF1157 at 472.919 kb on - strand, within GFF1157 at 472.974 kb on + strand at 472.974 kb on + strand at 472.974 kb on + strand at 472.974 kb on + strand at 472.974 kb on + strand at 472.974 kb on + strand at 472.975 kb on - strand at 472.975 kb on - strand at 472.975 kb on - strand at 472.975 kb on - strand at 472.975 kb on - strand at 472.975 kb on - strand at 472.975 kb on - strand at 472.975 kb on - strand at 473.031 kb on + strand at 473.031 kb on + strand at 473.031 kb on + strand at 473.032 kb on - strand at 473.032 kb on - strand at 473.042 kb on + strand at 473.042 kb on + strand at 473.042 kb on + strand at 473.042 kb on + strand at 473.043 kb on - strand at 473.043 kb on - strand at 473.043 kb on - strand at 473.043 kb on - strand at 473.043 kb on - strand at 473.043 kb on - strand at 473.043 kb on - strand at 473.043 kb on - strand at 473.061 kb on + strand at 473.061 kb on + strand at 473.061 kb on + strand at 473.062 kb on - strand at 473.062 kb on - strand at 473.077 kb on + strand at 473.077 kb on + strand at 473.077 kb on + strand at 473.078 kb on - strand at 473.078 kb on - strand at 473.118 kb on + strand at 473.238 kb on + strand at 473.238 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with calcium pantothenate 10 mg/mL remove 471,526 + GFF1155 0.44 -0.6 471,526 + GFF1155 0.44 -0.6 471,526 + GFF1155 0.44 +0.0 471,527 - GFF1155 0.44 -0.3 471,527 - GFF1155 0.44 -1.2 471,527 - GFF1155 0.44 -0.5 471,527 - GFF1155 0.44 -0.3 471,527 - GFF1155 0.44 -2.0 471,679 + GFF1155 0.63 +0.6 471,679 + GFF1155 0.63 -0.1 471,679 + GFF1155 0.63 -1.6 471,680 - GFF1155 0.63 +0.1 471,680 - GFF1155 0.63 -1.1 471,680 - GFF1155 0.63 -2.1 471,680 - GFF1155 0.63 -0.4 471,956 + -1.8 471,956 + +0.9 471,956 + -0.8 471,956 + -1.1 471,956 + +0.3 471,956 + -2.4 471,956 + -0.1 471,957 - -0.6 471,957 - -0.1 471,957 - -0.6 471,957 - +0.3 472,053 + GFF1156 0.12 +0.0 472,054 - GFF1156 0.12 +0.1 472,054 - GFF1156 0.12 +0.5 472,135 + GFF1156 0.31 +0.2 472,135 + GFF1156 0.31 -0.5 472,135 + GFF1156 0.31 +0.7 472,136 - GFF1156 0.31 +0.7 472,136 - GFF1156 0.31 +0.9 472,136 - GFF1156 0.31 -0.9 472,416 + -0.5 472,417 - -0.5 472,417 - -0.3 472,417 - +0.8 472,417 - -0.9 472,417 - -1.1 472,417 - -1.7 472,417 - +0.7 472,417 - -2.3 472,417 - +0.1 472,417 - +0.2 472,419 + -0.9 472,419 + -0.1 472,419 + -1.0 472,419 + -1.5 472,419 + -2.6 472,420 - -0.9 472,420 - -0.7 472,420 - -1.3 472,420 - +0.3 472,420 - -0.8 472,420 - -2.4 472,425 + -2.0 472,425 + -0.1 472,425 + -0.5 472,431 + +0.2 472,431 + +1.7 472,553 - GFF1157 0.23 -0.8 472,553 - GFF1157 0.23 -1.1 472,664 + GFF1157 0.43 -0.5 472,665 - GFF1157 0.43 -0.8 472,849 + GFF1157 0.75 +0.5 472,849 + GFF1157 0.75 -1.7 472,849 + GFF1157 0.75 -0.6 472,850 - GFF1157 0.75 -2.0 472,886 + GFF1157 0.82 -0.2 472,918 + GFF1157 0.87 -1.8 472,918 + GFF1157 0.87 +0.0 472,918 + GFF1157 0.87 +0.6 472,918 + GFF1157 0.87 -0.1 472,919 - GFF1157 0.88 -0.2 472,974 + -0.5 472,974 + +0.5 472,974 + +0.5 472,974 + +0.4 472,974 + -0.3 472,974 + -0.1 472,975 - -0.2 472,975 - +0.5 472,975 - +0.7 472,975 - +0.1 472,975 - +0.1 472,975 - +0.3 472,975 - +1.0 472,975 - -0.5 473,031 + +0.7 473,031 + -0.8 473,031 + +0.2 473,032 - -1.5 473,032 - -1.7 473,042 + +0.5 473,042 + -0.3 473,042 + -0.3 473,042 + -0.7 473,043 - -0.3 473,043 - -1.7 473,043 - -1.0 473,043 - +0.5 473,043 - +1.0 473,043 - +1.5 473,043 - +0.7 473,043 - -0.1 473,061 + +1.2 473,061 + -0.6 473,061 + +0.2 473,062 - +0.0 473,062 - -0.4 473,077 + -1.2 473,077 + -0.6 473,077 + +0.4 473,078 - -0.1 473,078 - -0.7 473,118 + -0.6 473,238 + -0.9 473,238 + -0.5
Or see this region's nucleotide sequence