Strain Fitness in Variovorax sp. SCN45 around GFF864

Experiment: M9 with calcium pantothenate 10 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9 with calcium pantothenate 10 mg/mL
170,649	+		GFF863	0.12	-1.1
170,650	-		GFF863	0.12	+0.4
170,650	-		GFF863	0.12	-2.7
171,099	+		GFF863	0.55	-1.4
171,099	+		GFF863	0.55	+1.7
171,099	+		GFF863	0.55	-0.6
171,099	+		GFF863	0.55	-0.1
171,100	-		GFF863	0.55	+1.0
171,100	-		GFF863	0.55	-0.9
171,100	-		GFF863	0.55	+0.1
171,100	-		GFF863	0.55	-0.1
171,303	+		GFF863	0.75	-0.9
171,304	-		GFF863	0.75	+0.4
171,304	-		GFF863	0.75	+1.0
171,750	-		GFF864	0.12	-1.6
171,750	-		GFF864	0.12	-0.9
173,126	+				-1.4
173,749	-		GFF865	0.58	-1.4
173,751	+		GFF865	0.58	-0.4
173,751	+		GFF865	0.58	+0.9
173,752	-		GFF865	0.58	-0.6
174,093	+				-0.6