Strain Fitness in Variovorax sp. SCN45 around GFF6221

Experiment: M9 with calcium pantothenate 10 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9 with calcium pantothenate 10 mg/mL
454	+		GFF6221	0.55	-0.5
557	-		GFF6221	0.71	-1.2
1,233	+		GFF6222	0.14	-0.8
1,233	+		GFF6222	0.14	+2.3
1,234	-		GFF6222	0.14	-1.3
1,605	+		GFF6222	0.24	+0.3
1,605	+		GFF6222	0.24	+0.0
1,605	+		GFF6222	0.24	-1.0
1,605	+		GFF6222	0.24	+0.5
1,605	+		GFF6222	0.24	-1.3
1,606	-		GFF6222	0.24	+0.3
1,606	-		GFF6222	0.24	+0.4
1,606	-		GFF6222	0.24	+0.3
1,606	-		GFF6222	0.24	+1.3
1,606	-		GFF6222	0.24	-0.5
1,606	-		GFF6222	0.24	-1.1
1,606	-		GFF6222	0.24	-0.9
1,606	-		GFF6222	0.24	-0.0
1,606	-		GFF6222	0.24	+0.6