Experiment: M9 with calcium pantothenate 10 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF5814 and GFF5815 are separated by 106 nucleotides GFF5815 and GFF5816 are separated by 37 nucleotides GFF5816 and GFF5817 are separated by 60 nucleotides
GFF5814 - Rhodanese-related sulfurtransferase, at 193,142 to 194,080
GFF5814
GFF5815 - Uncharacterized MFS-type transporter, at 194,187 to 195,401
GFF5815
GFF5816 - no description, at 195,439 to 196,311
GFF5816
GFF5817 - Two-component system sensor histidine kinase, at 196,372 to 197,745
GFF5817
Position (kb) 194
195
196 Strain fitness (log2 ratio) -2
-1
0
1 at 193.712 kb on + strand, within GFF5814 at 193.943 kb on + strand, within GFF5814 at 193.943 kb on + strand, within GFF5814 at 193.944 kb on - strand, within GFF5814 at 193.944 kb on - strand, within GFF5814 at 194.129 kb on - strand at 194.129 kb on - strand at 194.286 kb on + strand at 194.287 kb on - strand at 194.287 kb on - strand at 194.287 kb on - strand at 194.287 kb on - strand at 194.287 kb on - strand at 194.379 kb on + strand, within GFF5815 at 194.859 kb on + strand, within GFF5815 at 194.860 kb on - strand, within GFF5815 at 195.099 kb on + strand, within GFF5815 at 195.099 kb on + strand, within GFF5815 at 195.285 kb on + strand at 195.285 kb on + strand at 195.285 kb on + strand at 195.285 kb on + strand at 195.286 kb on - strand at 195.286 kb on - strand at 195.286 kb on - strand at 195.351 kb on + strand at 195.351 kb on + strand at 195.352 kb on - strand at 195.352 kb on - strand at 195.352 kb on - strand at 195.652 kb on + strand, within GFF5816 at 195.653 kb on - strand, within GFF5816 at 195.653 kb on - strand, within GFF5816 at 195.653 kb on - strand, within GFF5816 at 195.653 kb on - strand, within GFF5816 at 195.653 kb on - strand, within GFF5816 at 195.722 kb on + strand, within GFF5816 at 195.824 kb on + strand, within GFF5816 at 195.965 kb on + strand, within GFF5816 at 196.174 kb on + strand, within GFF5816 at 196.175 kb on - strand, within GFF5816 at 196.357 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with calcium pantothenate 10 mg/mL remove 193,712 + GFF5814 0.61 -1.1 193,943 + GFF5814 0.85 -0.3 193,943 + GFF5814 0.85 +0.4 193,944 - GFF5814 0.85 +0.4 193,944 - GFF5814 0.85 -0.8 194,129 - -1.0 194,129 - -0.9 194,286 + -0.6 194,287 - -0.3 194,287 - -0.7 194,287 - +1.2 194,287 - -1.1 194,287 - -1.1 194,379 + GFF5815 0.16 -0.3 194,859 + GFF5815 0.55 -0.0 194,860 - GFF5815 0.55 -1.2 195,099 + GFF5815 0.75 -1.5 195,099 + GFF5815 0.75 +0.2 195,285 + +0.4 195,285 + -0.9 195,285 + -0.6 195,285 + -0.4 195,286 - +0.1 195,286 - +1.1 195,286 - -0.7 195,351 + +0.9 195,351 + -0.8 195,352 - -1.2 195,352 - -1.3 195,352 - -0.4 195,652 + GFF5816 0.24 -0.6 195,653 - GFF5816 0.25 -0.1 195,653 - GFF5816 0.25 -0.0 195,653 - GFF5816 0.25 -2.1 195,653 - GFF5816 0.25 -1.0 195,653 - GFF5816 0.25 -0.1 195,722 + GFF5816 0.32 -0.3 195,824 + GFF5816 0.44 -0.3 195,965 + GFF5816 0.60 -0.5 196,174 + GFF5816 0.84 -0.5 196,175 - GFF5816 0.84 -0.6 196,357 + -0.3
Or see this region's nucleotide sequence