Strain Fitness in Variovorax sp. SCN45 around GFF4748

Experiment: M9 with calcium pantothenate 10 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9 with calcium pantothenate 10 mg/mL
115,030	+		GFF4747	0.15	+1.8
115,030	+		GFF4747	0.15	-0.2
115,447	+		GFF4747	0.57	-0.6
115,447	+		GFF4747	0.57	-0.6
115,447	+		GFF4747	0.57	-0.5
115,447	+		GFF4747	0.57	+0.2
115,459	+		GFF4747	0.58	-0.9
115,546	+		GFF4747	0.67	+0.6
115,837	+				+0.1
116,036	+		GFF4748	0.19	-0.6
116,204	+		GFF4748	0.41	-1.1
116,396	+		GFF4748	0.66	-1.3
116,396	+		GFF4748	0.66	-0.8
116,681	+				-0.5
116,918	+		GFF4749	0.54	-0.1
117,104	+				-0.6
117,104	+				-1.1
117,104	+				-0.4
117,104	+				+0.2
117,104	+				+0.6
117,162	+				-1.8
117,162	+				-0.1