Experiment: M9 with calcium pantothenate 10 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF4094 and GFF4095 are separated by 137 nucleotides GFF4095 and GFF4096 are separated by 403 nucleotides
GFF4094 - no description, at 305,056 to 306,099
GFF4094
GFF4095 - no description, at 306,237 to 306,881
GFF4095
GFF4096 - no description, at 307,285 to 308,307
GFF4096
Position (kb) 306
307 Strain fitness (log2 ratio) -2
-1
0
1
2 at 305.369 kb on + strand, within GFF4094 at 305.369 kb on + strand, within GFF4094 at 305.369 kb on + strand, within GFF4094 at 305.370 kb on - strand, within GFF4094 at 305.394 kb on - strand, within GFF4094 at 305.394 kb on - strand, within GFF4094 at 305.543 kb on + strand, within GFF4094 at 305.849 kb on + strand, within GFF4094 at 305.849 kb on + strand, within GFF4094 at 305.850 kb on - strand, within GFF4094 at 305.864 kb on + strand, within GFF4094 at 305.936 kb on + strand, within GFF4094 at 305.936 kb on + strand, within GFF4094 at 305.936 kb on + strand, within GFF4094 at 305.936 kb on + strand, within GFF4094 at 305.937 kb on - strand, within GFF4094 at 305.937 kb on - strand, within GFF4094 at 305.937 kb on - strand, within GFF4094 at 305.937 kb on - strand, within GFF4094 at 306.004 kb on + strand at 306.004 kb on + strand at 306.080 kb on + strand at 306.081 kb on - strand at 306.081 kb on - strand at 306.125 kb on - strand at 306.125 kb on - strand at 306.147 kb on - strand at 306.157 kb on - strand at 306.157 kb on - strand at 306.214 kb on - strand at 306.214 kb on - strand at 306.239 kb on - strand at 306.239 kb on - strand at 306.239 kb on - strand at 306.616 kb on + strand, within GFF4095 at 306.616 kb on + strand, within GFF4095 at 306.661 kb on + strand, within GFF4095 at 306.661 kb on + strand, within GFF4095 at 306.662 kb on - strand, within GFF4095 at 306.662 kb on - strand, within GFF4095 at 306.662 kb on - strand, within GFF4095 at 306.662 kb on - strand, within GFF4095 at 306.885 kb on - strand at 306.891 kb on + strand at 306.891 kb on + strand at 306.891 kb on + strand at 306.892 kb on - strand at 306.892 kb on - strand at 306.894 kb on - strand at 306.895 kb on + strand at 306.905 kb on - strand at 306.985 kb on + strand at 306.986 kb on - strand at 306.986 kb on - strand at 306.986 kb on - strand at 306.986 kb on - strand at 306.986 kb on - strand at 307.014 kb on + strand at 307.014 kb on + strand at 307.014 kb on + strand at 307.014 kb on + strand at 307.014 kb on + strand at 307.014 kb on + strand at 307.015 kb on - strand at 307.015 kb on - strand at 307.015 kb on - strand at 307.015 kb on - strand at 307.020 kb on + strand at 307.020 kb on + strand at 307.021 kb on - strand at 307.021 kb on - strand at 307.021 kb on - strand at 307.105 kb on + strand at 307.106 kb on - strand at 307.135 kb on - strand at 307.312 kb on + strand at 307.312 kb on + strand at 307.313 kb on - strand at 307.313 kb on - strand at 307.313 kb on - strand at 307.511 kb on - strand, within GFF4096 at 307.511 kb on - strand, within GFF4096 at 307.511 kb on - strand, within GFF4096 at 307.609 kb on + strand, within GFF4096 at 307.610 kb on - strand, within GFF4096 at 307.610 kb on - strand, within GFF4096
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with calcium pantothenate 10 mg/mL remove 305,369 + GFF4094 0.30 +0.6 305,369 + GFF4094 0.30 -1.2 305,369 + GFF4094 0.30 +0.4 305,370 - GFF4094 0.30 +0.1 305,394 - GFF4094 0.32 +0.1 305,394 - GFF4094 0.32 -0.2 305,543 + GFF4094 0.47 -0.8 305,849 + GFF4094 0.76 -0.5 305,849 + GFF4094 0.76 -0.1 305,850 - GFF4094 0.76 -0.7 305,864 + GFF4094 0.77 -0.1 305,936 + GFF4094 0.84 -1.6 305,936 + GFF4094 0.84 -0.3 305,936 + GFF4094 0.84 -1.1 305,936 + GFF4094 0.84 -0.9 305,937 - GFF4094 0.84 +1.6 305,937 - GFF4094 0.84 +0.5 305,937 - GFF4094 0.84 -0.4 305,937 - GFF4094 0.84 +0.2 306,004 + -0.4 306,004 + -1.0 306,080 + -0.1 306,081 - -0.4 306,081 - +0.0 306,125 - -0.1 306,125 - -0.5 306,147 - -0.6 306,157 - -0.7 306,157 - -0.2 306,214 - -0.7 306,214 - -0.6 306,239 - +0.5 306,239 - +0.0 306,239 - -0.5 306,616 + GFF4095 0.59 -0.9 306,616 + GFF4095 0.59 -0.6 306,661 + GFF4095 0.66 +1.9 306,661 + GFF4095 0.66 -2.2 306,662 - GFF4095 0.66 +0.6 306,662 - GFF4095 0.66 +1.9 306,662 - GFF4095 0.66 +1.6 306,662 - GFF4095 0.66 +0.6 306,885 - +0.3 306,891 + +0.7 306,891 + -0.2 306,891 + +0.6 306,892 - -2.1 306,892 - -1.0 306,894 - +0.1 306,895 + -0.5 306,905 - +1.4 306,985 + -1.0 306,986 - +0.2 306,986 - -0.5 306,986 - -0.3 306,986 - -0.0 306,986 - +0.2 307,014 + -0.2 307,014 + +0.6 307,014 + +0.3 307,014 + +0.9 307,014 + -0.8 307,014 + -1.3 307,015 - -1.7 307,015 - +0.4 307,015 - +0.2 307,015 - +2.4 307,020 + +0.1 307,020 + +0.7 307,021 - -2.5 307,021 - +0.6 307,021 - -0.3 307,105 + -1.1 307,106 - -1.9 307,135 - +0.4 307,312 + +0.6 307,312 + -0.5 307,313 - +0.2 307,313 - -0.1 307,313 - +0.2 307,511 - GFF4096 0.22 +0.5 307,511 - GFF4096 0.22 +0.7 307,511 - GFF4096 0.22 +0.3 307,609 + GFF4096 0.32 -0.5 307,610 - GFF4096 0.32 +0.4 307,610 - GFF4096 0.32 +0.6
Or see this region's nucleotide sequence