Experiment: M9 with calcium pantothenate 10 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF2846 and GFF2847 are separated by 87 nucleotides GFF2847 and GFF2848 are separated by 433 nucleotides
GFF2846 - Putative Zn-dependent oxidoreductase PA5234, at 270,741 to 271,727
GFF2846
GFF2847 - histone-like nucleoid-structuring protein H-NS, at 271,815 to 272,159
GFF2847
GFF2848 - UPF0098 protein PH1269, at 272,593 to 273,225
GFF2848
Position (kb) 271
272
273 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4 at 270.891 kb on + strand, within GFF2846 at 270.891 kb on + strand, within GFF2846 at 270.891 kb on + strand, within GFF2846 at 270.891 kb on + strand, within GFF2846 at 270.891 kb on + strand, within GFF2846 at 270.892 kb on - strand, within GFF2846 at 270.892 kb on - strand, within GFF2846 at 270.892 kb on - strand, within GFF2846 at 270.892 kb on - strand, within GFF2846 at 270.892 kb on - strand, within GFF2846 at 270.892 kb on - strand, within GFF2846 at 270.892 kb on - strand, within GFF2846 at 270.893 kb on - strand, within GFF2846 at 270.933 kb on + strand, within GFF2846 at 270.933 kb on + strand, within GFF2846 at 270.933 kb on + strand, within GFF2846 at 270.933 kb on + strand, within GFF2846 at 270.934 kb on - strand, within GFF2846 at 270.934 kb on - strand, within GFF2846 at 271.031 kb on + strand, within GFF2846 at 271.031 kb on + strand, within GFF2846 at 271.031 kb on + strand, within GFF2846 at 271.031 kb on + strand, within GFF2846 at 271.031 kb on + strand, within GFF2846 at 271.031 kb on + strand, within GFF2846 at 271.031 kb on + strand, within GFF2846 at 271.032 kb on - strand, within GFF2846 at 271.032 kb on - strand, within GFF2846 at 271.032 kb on - strand, within GFF2846 at 271.032 kb on - strand, within GFF2846 at 271.032 kb on - strand, within GFF2846 at 271.032 kb on - strand, within GFF2846 at 271.032 kb on - strand, within GFF2846 at 271.032 kb on - strand, within GFF2846 at 271.032 kb on - strand, within GFF2846 at 271.032 kb on - strand, within GFF2846 at 271.032 kb on - strand, within GFF2846 at 271.032 kb on - strand, within GFF2846 at 271.032 kb on - strand, within GFF2846 at 271.032 kb on - strand, within GFF2846 at 271.110 kb on + strand, within GFF2846 at 271.110 kb on + strand, within GFF2846 at 271.110 kb on + strand, within GFF2846 at 271.110 kb on + strand, within GFF2846 at 271.110 kb on + strand, within GFF2846 at 271.110 kb on + strand, within GFF2846 at 271.110 kb on + strand, within GFF2846 at 271.110 kb on + strand, within GFF2846 at 271.110 kb on + strand, within GFF2846 at 271.110 kb on + strand, within GFF2846 at 271.110 kb on + strand, within GFF2846 at 271.110 kb on + strand, within GFF2846 at 271.110 kb on + strand, within GFF2846 at 271.110 kb on + strand, within GFF2846 at 271.110 kb on + strand, within GFF2846 at 271.110 kb on + strand, within GFF2846 at 271.110 kb on + strand, within GFF2846 at 271.110 kb on + strand, within GFF2846 at 271.110 kb on + strand, within GFF2846 at 271.110 kb on + strand, within GFF2846 at 271.110 kb on + strand, within GFF2846 at 271.110 kb on + strand, within GFF2846 at 271.110 kb on + strand, within GFF2846 at 271.110 kb on + strand, within GFF2846 at 271.110 kb on + strand, within GFF2846 at 271.110 kb on + strand, within GFF2846 at 271.110 kb on + strand, within GFF2846 at 271.110 kb on + strand, within GFF2846 at 271.111 kb on - strand, within GFF2846 at 271.111 kb on - strand, within GFF2846 at 271.111 kb on - strand, within GFF2846 at 271.111 kb on - strand, within GFF2846 at 271.111 kb on - strand, within GFF2846 at 271.111 kb on - strand, within GFF2846 at 271.111 kb on - strand, within GFF2846 at 271.111 kb on - strand, within GFF2846 at 271.111 kb on - strand, within GFF2846 at 271.111 kb on - strand, within GFF2846 at 271.111 kb on - strand, within GFF2846 at 271.111 kb on - strand, within GFF2846 at 271.111 kb on - strand, within GFF2846 at 271.111 kb on - strand, within GFF2846 at 271.111 kb on - strand, within GFF2846 at 271.111 kb on - strand, within GFF2846 at 271.111 kb on - strand, within GFF2846 at 271.111 kb on - strand, within GFF2846 at 271.111 kb on - strand, within GFF2846 at 271.111 kb on - strand, within GFF2846 at 271.111 kb on - strand, within GFF2846 at 271.111 kb on - strand, within GFF2846 at 271.111 kb on - strand, within GFF2846 at 271.111 kb on - strand, within GFF2846 at 271.111 kb on - strand, within GFF2846 at 271.111 kb on - strand, within GFF2846 at 271.111 kb on - strand, within GFF2846 at 271.111 kb on - strand, within GFF2846 at 271.111 kb on - strand, within GFF2846 at 271.111 kb on - strand, within GFF2846 at 271.111 kb on - strand, within GFF2846 at 271.111 kb on - strand, within GFF2846 at 271.111 kb on - strand, within GFF2846 at 271.111 kb on - strand, within GFF2846 at 271.311 kb on + strand, within GFF2846 at 271.311 kb on + strand, within GFF2846 at 271.311 kb on + strand, within GFF2846 at 271.311 kb on + strand, within GFF2846 at 271.311 kb on + strand, within GFF2846 at 271.311 kb on + strand, within GFF2846 at 271.311 kb on + strand, within GFF2846 at 271.311 kb on + strand, within GFF2846 at 271.311 kb on + strand, within GFF2846 at 271.312 kb on - strand, within GFF2846 at 271.312 kb on - strand, within GFF2846 at 271.312 kb on - strand, within GFF2846 at 271.312 kb on - strand, within GFF2846 at 271.312 kb on - strand, within GFF2846 at 271.312 kb on - strand, within GFF2846 at 271.312 kb on - strand, within GFF2846 at 271.312 kb on - strand, within GFF2846 at 271.312 kb on - strand, within GFF2846 at 271.312 kb on - strand, within GFF2846 at 271.312 kb on - strand, within GFF2846 at 271.312 kb on - strand, within GFF2846 at 271.312 kb on - strand, within GFF2846 at 271.312 kb on - strand, within GFF2846 at 271.312 kb on - strand, within GFF2846 at 271.312 kb on - strand, within GFF2846 at 271.312 kb on - strand, within GFF2846 at 271.389 kb on + strand, within GFF2846 at 271.389 kb on + strand, within GFF2846 at 271.389 kb on + strand, within GFF2846 at 271.389 kb on + strand, within GFF2846 at 271.389 kb on + strand, within GFF2846 at 271.389 kb on + strand, within GFF2846 at 271.389 kb on + strand, within GFF2846 at 271.389 kb on + strand, within GFF2846 at 271.389 kb on + strand, within GFF2846 at 271.390 kb on - strand, within GFF2846 at 271.390 kb on - strand, within GFF2846 at 271.390 kb on - strand, within GFF2846 at 271.390 kb on - strand, within GFF2846 at 271.390 kb on - strand, within GFF2846 at 271.390 kb on - strand, within GFF2846 at 271.390 kb on - strand, within GFF2846 at 271.390 kb on - strand, within GFF2846 at 271.390 kb on - strand, within GFF2846 at 271.453 kb on - strand, within GFF2846 at 271.453 kb on - strand, within GFF2846 at 271.453 kb on - strand, within GFF2846 at 271.609 kb on - strand, within GFF2846 at 271.675 kb on - strand at 271.816 kb on + strand at 271.816 kb on + strand at 271.816 kb on + strand at 271.816 kb on + strand at 271.816 kb on + strand at 271.816 kb on + strand at 271.816 kb on + strand at 271.816 kb on + strand at 271.816 kb on + strand at 271.816 kb on + strand at 271.816 kb on + strand at 271.816 kb on + strand at 271.816 kb on + strand at 271.816 kb on + strand at 271.817 kb on - strand at 271.817 kb on - strand at 271.817 kb on - strand at 271.817 kb on - strand at 271.817 kb on - strand at 271.817 kb on - strand at 271.817 kb on - strand at 271.817 kb on - strand at 271.817 kb on - strand at 271.817 kb on - strand at 271.924 kb on + strand, within GFF2847 at 271.924 kb on + strand, within GFF2847 at 272.017 kb on + strand, within GFF2847 at 272.018 kb on - strand, within GFF2847 at 272.069 kb on + strand, within GFF2847 at 272.138 kb on + strand at 272.139 kb on - strand at 272.256 kb on + strand at 272.277 kb on - strand at 272.303 kb on - strand at 272.303 kb on - strand at 272.303 kb on - strand at 272.387 kb on + strand at 272.387 kb on + strand at 272.388 kb on - strand at 272.388 kb on - strand at 272.402 kb on + strand at 272.402 kb on + strand at 272.403 kb on - strand at 272.403 kb on - strand at 272.403 kb on - strand at 272.403 kb on - strand at 272.403 kb on - strand at 272.412 kb on + strand at 272.413 kb on - strand at 272.413 kb on - strand at 272.413 kb on - strand at 272.426 kb on + strand at 272.783 kb on + strand, within GFF2848 at 272.783 kb on + strand, within GFF2848 at 272.784 kb on - strand, within GFF2848 at 272.784 kb on - strand, within GFF2848 at 272.784 kb on - strand, within GFF2848 at 272.784 kb on - strand, within GFF2848 at 272.784 kb on - strand, within GFF2848 at 272.891 kb on - strand, within GFF2848 at 273.065 kb on + strand, within GFF2848 at 273.065 kb on + strand, within GFF2848 at 273.065 kb on + strand, within GFF2848 at 273.065 kb on + strand, within GFF2848 at 273.115 kb on + strand, within GFF2848 at 273.116 kb on - strand, within GFF2848 at 273.116 kb on - strand, within GFF2848 at 273.152 kb on - strand, within GFF2848 at 273.153 kb on - strand, within GFF2848
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with calcium pantothenate 10 mg/mL remove 270,891 + GFF2846 0.15 +0.6 270,891 + GFF2846 0.15 -0.6 270,891 + GFF2846 0.15 -0.4 270,891 + GFF2846 0.15 -1.1 270,891 + GFF2846 0.15 +1.3 270,892 - GFF2846 0.15 -0.4 270,892 - GFF2846 0.15 +0.2 270,892 - GFF2846 0.15 +1.4 270,892 - GFF2846 0.15 +0.7 270,892 - GFF2846 0.15 -0.7 270,892 - GFF2846 0.15 -0.7 270,892 - GFF2846 0.15 -0.8 270,893 - GFF2846 0.15 -1.0 270,933 + GFF2846 0.19 -0.5 270,933 + GFF2846 0.19 -0.0 270,933 + GFF2846 0.19 -1.0 270,933 + GFF2846 0.19 -0.3 270,934 - GFF2846 0.20 -0.4 270,934 - GFF2846 0.20 -0.6 271,031 + GFF2846 0.29 -1.0 271,031 + GFF2846 0.29 -0.5 271,031 + GFF2846 0.29 +0.9 271,031 + GFF2846 0.29 +0.3 271,031 + GFF2846 0.29 -0.8 271,031 + GFF2846 0.29 -0.4 271,031 + GFF2846 0.29 -0.1 271,032 - GFF2846 0.29 +0.7 271,032 - GFF2846 0.29 +0.6 271,032 - GFF2846 0.29 -0.6 271,032 - GFF2846 0.29 +0.8 271,032 - GFF2846 0.29 -0.2 271,032 - GFF2846 0.29 +1.3 271,032 - GFF2846 0.29 -1.1 271,032 - GFF2846 0.29 +0.9 271,032 - GFF2846 0.29 +0.0 271,032 - GFF2846 0.29 -1.1 271,032 - GFF2846 0.29 -0.2 271,032 - GFF2846 0.29 -1.4 271,032 - GFF2846 0.29 -0.5 271,032 - GFF2846 0.29 +1.3 271,110 + GFF2846 0.37 +0.0 271,110 + GFF2846 0.37 +0.1 271,110 + GFF2846 0.37 -0.3 271,110 + GFF2846 0.37 -0.3 271,110 + GFF2846 0.37 +0.2 271,110 + GFF2846 0.37 -0.5 271,110 + GFF2846 0.37 +2.6 271,110 + GFF2846 0.37 -1.4 271,110 + GFF2846 0.37 -0.4 271,110 + GFF2846 0.37 +1.0 271,110 + GFF2846 0.37 +0.8 271,110 + GFF2846 0.37 -0.1 271,110 + GFF2846 0.37 -0.1 271,110 + GFF2846 0.37 -0.5 271,110 + GFF2846 0.37 -1.1 271,110 + GFF2846 0.37 +0.4 271,110 + GFF2846 0.37 +0.1 271,110 + GFF2846 0.37 +0.0 271,110 + GFF2846 0.37 +0.5 271,110 + GFF2846 0.37 -1.0 271,110 + GFF2846 0.37 -0.2 271,110 + GFF2846 0.37 +0.9 271,110 + GFF2846 0.37 -0.9 271,110 + GFF2846 0.37 +0.3 271,110 + GFF2846 0.37 -0.0 271,110 + GFF2846 0.37 -1.2 271,110 + GFF2846 0.37 -0.4 271,110 + GFF2846 0.37 -1.0 271,111 - GFF2846 0.37 +0.4 271,111 - GFF2846 0.37 -0.6 271,111 - GFF2846 0.37 -0.7 271,111 - GFF2846 0.37 -0.8 271,111 - GFF2846 0.37 -0.1 271,111 - GFF2846 0.37 -0.2 271,111 - GFF2846 0.37 +1.0 271,111 - GFF2846 0.37 -0.0 271,111 - GFF2846 0.37 -0.5 271,111 - GFF2846 0.37 -0.7 271,111 - GFF2846 0.37 -0.4 271,111 - GFF2846 0.37 -0.4 271,111 - GFF2846 0.37 +0.1 271,111 - GFF2846 0.37 -1.3 271,111 - GFF2846 0.37 -1.2 271,111 - GFF2846 0.37 -1.2 271,111 - GFF2846 0.37 -1.0 271,111 - GFF2846 0.37 +0.2 271,111 - GFF2846 0.37 -0.7 271,111 - GFF2846 0.37 -0.8 271,111 - GFF2846 0.37 -0.9 271,111 - GFF2846 0.37 -0.8 271,111 - GFF2846 0.37 -0.3 271,111 - GFF2846 0.37 -0.1 271,111 - GFF2846 0.37 -1.2 271,111 - GFF2846 0.37 -1.0 271,111 - GFF2846 0.37 +0.0 271,111 - GFF2846 0.37 -1.1 271,111 - GFF2846 0.37 -0.3 271,111 - GFF2846 0.37 -0.7 271,111 - GFF2846 0.37 +1.4 271,111 - GFF2846 0.37 -0.7 271,111 - GFF2846 0.37 +0.3 271,111 - GFF2846 0.37 -0.1 271,311 + GFF2846 0.58 -0.6 271,311 + GFF2846 0.58 -0.5 271,311 + GFF2846 0.58 +0.3 271,311 + GFF2846 0.58 -0.3 271,311 + GFF2846 0.58 -1.2 271,311 + GFF2846 0.58 -0.6 271,311 + GFF2846 0.58 +2.0 271,311 + GFF2846 0.58 -1.0 271,311 + GFF2846 0.58 +0.4 271,312 - GFF2846 0.58 +3.0 271,312 - GFF2846 0.58 -1.4 271,312 - GFF2846 0.58 -0.3 271,312 - GFF2846 0.58 +0.2 271,312 - GFF2846 0.58 +1.1 271,312 - GFF2846 0.58 +0.3 271,312 - GFF2846 0.58 +0.1 271,312 - GFF2846 0.58 -0.7 271,312 - GFF2846 0.58 +2.1 271,312 - GFF2846 0.58 -1.5 271,312 - GFF2846 0.58 -0.8 271,312 - GFF2846 0.58 -0.0 271,312 - GFF2846 0.58 -0.2 271,312 - GFF2846 0.58 +0.5 271,312 - GFF2846 0.58 +0.8 271,312 - GFF2846 0.58 -0.0 271,312 - GFF2846 0.58 -0.4 271,389 + GFF2846 0.66 -0.5 271,389 + GFF2846 0.66 -0.6 271,389 + GFF2846 0.66 +0.6 271,389 + GFF2846 0.66 -0.8 271,389 + GFF2846 0.66 -1.1 271,389 + GFF2846 0.66 +1.2 271,389 + GFF2846 0.66 -0.1 271,389 + GFF2846 0.66 +0.2 271,389 + GFF2846 0.66 -1.0 271,390 - GFF2846 0.66 +0.0 271,390 - GFF2846 0.66 +0.0 271,390 - GFF2846 0.66 -0.7 271,390 - GFF2846 0.66 +0.1 271,390 - GFF2846 0.66 -0.9 271,390 - GFF2846 0.66 +0.2 271,390 - GFF2846 0.66 +0.0 271,390 - GFF2846 0.66 -0.1 271,390 - GFF2846 0.66 -0.9 271,453 - GFF2846 0.72 +1.8 271,453 - GFF2846 0.72 -1.1 271,453 - GFF2846 0.72 +0.4 271,609 - GFF2846 0.88 -0.2 271,675 - -0.0 271,816 + +0.6 271,816 + +0.1 271,816 + +0.4 271,816 + -0.4 271,816 + +0.0 271,816 + +1.2 271,816 + -3.7 271,816 + -0.6 271,816 + +0.1 271,816 + -0.7 271,816 + +0.6 271,816 + +0.2 271,816 + +0.6 271,816 + +0.1 271,817 - -3.2 271,817 - -0.2 271,817 - +0.3 271,817 - -0.8 271,817 - -0.5 271,817 - -0.5 271,817 - +0.4 271,817 - -0.1 271,817 - +0.6 271,817 - -0.8 271,924 + GFF2847 0.32 -1.7 271,924 + GFF2847 0.32 -2.0 272,017 + GFF2847 0.59 -2.2 272,018 - GFF2847 0.59 -0.7 272,069 + GFF2847 0.74 -1.7 272,138 + -1.8 272,139 - -0.2 272,256 + -1.3 272,277 - +0.8 272,303 - +1.4 272,303 - +0.0 272,303 - +0.1 272,387 + +0.9 272,387 + -0.9 272,388 - -1.2 272,388 - +0.4 272,402 + -0.2 272,402 + +0.5 272,403 - -0.1 272,403 - +0.6 272,403 - -1.7 272,403 - -0.7 272,403 - +0.5 272,412 + -0.2 272,413 - +0.5 272,413 - -1.1 272,413 - -0.1 272,426 + -0.7 272,783 + GFF2848 0.30 -0.9 272,783 + GFF2848 0.30 +0.4 272,784 - GFF2848 0.30 +1.4 272,784 - GFF2848 0.30 -1.2 272,784 - GFF2848 0.30 +0.3 272,784 - GFF2848 0.30 +0.2 272,784 - GFF2848 0.30 -0.3 272,891 - GFF2848 0.47 -0.3 273,065 + GFF2848 0.75 +0.6 273,065 + GFF2848 0.75 -0.2 273,065 + GFF2848 0.75 +3.8 273,065 + GFF2848 0.75 +0.6 273,115 + GFF2848 0.82 +1.3 273,116 - GFF2848 0.83 +1.0 273,116 - GFF2848 0.83 +0.2 273,152 - GFF2848 0.88 -2.8 273,153 - GFF2848 0.88 -2.0
Or see this region's nucleotide sequence