Experiment: M9 with calcium pantothenate 10 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF1697 and GFF1698 are separated by 133 nucleotides GFF1698 and GFF1699 are separated by 57 nucleotides GFF1699 and GFF1700 are separated by 43 nucleotides
GFF1697 - Argininosuccinate lyase-like protein, at 342,829 to 344,352
GFF1697
GFF1698 - BUG/TctC family periplasmic protein, at 344,486 to 345,445
GFF1698
GFF1699 - hypothetical protein, at 345,503 to 346,144
GFF1699
GFF1700 - hypothetical protein, at 346,188 to 347,210
GFF1700
Position (kb) 344
345
346 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 343.546 kb on + strand, within GFF1697 at 343.546 kb on + strand, within GFF1697 at 343.546 kb on + strand, within GFF1697 at 343.546 kb on + strand, within GFF1697 at 343.546 kb on + strand, within GFF1697 at 343.663 kb on + strand, within GFF1697 at 343.663 kb on + strand, within GFF1697 at 343.663 kb on + strand, within GFF1697 at 343.664 kb on - strand, within GFF1697 at 343.664 kb on - strand, within GFF1697 at 343.664 kb on - strand, within GFF1697 at 343.664 kb on - strand, within GFF1697 at 343.717 kb on + strand, within GFF1697 at 343.717 kb on + strand, within GFF1697 at 343.718 kb on - strand, within GFF1697 at 344.050 kb on + strand, within GFF1697 at 344.553 kb on - strand at 344.553 kb on - strand at 344.553 kb on - strand at 344.709 kb on - strand, within GFF1698 at 344.735 kb on + strand, within GFF1698 at 344.736 kb on - strand, within GFF1698 at 344.783 kb on + strand, within GFF1698 at 344.783 kb on + strand, within GFF1698 at 344.783 kb on + strand, within GFF1698 at 344.783 kb on + strand, within GFF1698 at 344.783 kb on + strand, within GFF1698 at 344.784 kb on - strand, within GFF1698 at 344.784 kb on - strand, within GFF1698 at 344.906 kb on + strand, within GFF1698 at 344.907 kb on - strand, within GFF1698 at 345.107 kb on + strand, within GFF1698 at 345.107 kb on + strand, within GFF1698 at 345.108 kb on - strand, within GFF1698 at 345.108 kb on - strand, within GFF1698 at 345.227 kb on + strand, within GFF1698 at 345.227 kb on + strand, within GFF1698 at 345.227 kb on + strand, within GFF1698 at 345.228 kb on - strand, within GFF1698 at 345.344 kb on + strand, within GFF1698 at 345.345 kb on - strand, within GFF1698 at 345.480 kb on + strand at 345.480 kb on + strand at 345.480 kb on + strand at 345.480 kb on + strand at 345.480 kb on + strand at 345.480 kb on + strand at 345.480 kb on + strand at 345.480 kb on + strand at 345.480 kb on + strand at 345.480 kb on + strand at 345.481 kb on - strand at 345.481 kb on - strand at 345.481 kb on - strand at 345.481 kb on - strand at 345.481 kb on - strand at 345.481 kb on - strand at 345.481 kb on - strand at 345.481 kb on - strand at 345.481 kb on - strand at 345.481 kb on - strand at 345.481 kb on - strand at 345.481 kb on - strand at 345.481 kb on - strand at 345.481 kb on - strand at 345.481 kb on - strand at 345.481 kb on - strand at 345.481 kb on - strand at 345.495 kb on - strand at 345.495 kb on - strand at 345.719 kb on + strand, within GFF1699 at 345.719 kb on + strand, within GFF1699 at 345.719 kb on + strand, within GFF1699 at 345.719 kb on + strand, within GFF1699 at 345.719 kb on + strand, within GFF1699 at 345.719 kb on + strand, within GFF1699 at 345.719 kb on + strand, within GFF1699 at 345.719 kb on + strand, within GFF1699 at 345.719 kb on + strand, within GFF1699 at 345.719 kb on + strand, within GFF1699 at 345.719 kb on + strand, within GFF1699 at 345.719 kb on + strand, within GFF1699 at 345.719 kb on + strand, within GFF1699 at 345.720 kb on - strand, within GFF1699 at 345.720 kb on - strand, within GFF1699 at 345.720 kb on - strand, within GFF1699 at 345.720 kb on - strand, within GFF1699 at 345.720 kb on - strand, within GFF1699 at 345.720 kb on - strand, within GFF1699 at 345.720 kb on - strand, within GFF1699 at 345.720 kb on - strand, within GFF1699 at 345.720 kb on - strand, within GFF1699 at 345.863 kb on + strand, within GFF1699 at 345.864 kb on - strand, within GFF1699 at 346.115 kb on + strand at 346.115 kb on + strand at 346.115 kb on + strand at 346.189 kb on + strand at 346.189 kb on + strand at 346.189 kb on + strand at 346.189 kb on + strand at 346.189 kb on + strand at 346.190 kb on - strand at 346.190 kb on - strand at 346.190 kb on - strand at 346.190 kb on - strand at 346.190 kb on - strand at 346.190 kb on - strand at 346.262 kb on + strand at 346.262 kb on + strand at 346.263 kb on - strand at 346.263 kb on - strand at 346.263 kb on - strand at 346.383 kb on + strand, within GFF1700
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with calcium pantothenate 10 mg/mL remove 343,546 + GFF1697 0.47 -1.1 343,546 + GFF1697 0.47 -0.2 343,546 + GFF1697 0.47 +1.0 343,546 + GFF1697 0.47 -0.8 343,546 + GFF1697 0.47 +0.6 343,663 + GFF1697 0.55 -1.0 343,663 + GFF1697 0.55 -0.6 343,663 + GFF1697 0.55 -0.1 343,664 - GFF1697 0.55 +0.5 343,664 - GFF1697 0.55 +1.4 343,664 - GFF1697 0.55 -0.6 343,664 - GFF1697 0.55 -0.5 343,717 + GFF1697 0.58 -0.2 343,717 + GFF1697 0.58 +0.9 343,718 - GFF1697 0.58 -0.4 344,050 + GFF1697 0.80 -0.6 344,553 - -1.3 344,553 - -1.5 344,553 - +0.7 344,709 - GFF1698 0.23 +0.3 344,735 + GFF1698 0.26 -0.7 344,736 - GFF1698 0.26 +0.1 344,783 + GFF1698 0.31 -0.5 344,783 + GFF1698 0.31 -0.3 344,783 + GFF1698 0.31 +0.2 344,783 + GFF1698 0.31 -0.2 344,783 + GFF1698 0.31 -0.1 344,784 - GFF1698 0.31 -0.2 344,784 - GFF1698 0.31 +0.5 344,906 + GFF1698 0.44 +1.3 344,907 - GFF1698 0.44 -0.7 345,107 + GFF1698 0.65 +0.1 345,107 + GFF1698 0.65 -0.0 345,108 - GFF1698 0.65 -0.3 345,108 - GFF1698 0.65 -0.7 345,227 + GFF1698 0.77 -0.1 345,227 + GFF1698 0.77 -0.9 345,227 + GFF1698 0.77 +0.8 345,228 - GFF1698 0.77 +0.5 345,344 + GFF1698 0.89 -0.3 345,345 - GFF1698 0.89 -0.0 345,480 + -0.6 345,480 + +0.3 345,480 + -0.9 345,480 + +0.0 345,480 + -0.6 345,480 + +0.5 345,480 + -0.1 345,480 + -0.2 345,480 + -0.4 345,480 + -0.7 345,481 - +0.1 345,481 - -0.7 345,481 - +0.3 345,481 - +1.2 345,481 - -0.0 345,481 - +0.3 345,481 - +0.1 345,481 - +1.2 345,481 - +0.8 345,481 - -1.4 345,481 - -0.4 345,481 - -0.2 345,481 - -1.0 345,481 - -0.8 345,481 - -0.8 345,481 - +0.2 345,481 - -0.4 345,495 - +1.0 345,495 - -0.0 345,719 + GFF1699 0.34 -0.7 345,719 + GFF1699 0.34 +3.1 345,719 + GFF1699 0.34 -0.0 345,719 + GFF1699 0.34 -0.8 345,719 + GFF1699 0.34 -0.4 345,719 + GFF1699 0.34 -1.3 345,719 + GFF1699 0.34 -0.9 345,719 + GFF1699 0.34 -0.5 345,719 + GFF1699 0.34 +0.2 345,719 + GFF1699 0.34 +0.2 345,719 + GFF1699 0.34 +0.2 345,719 + GFF1699 0.34 -0.7 345,719 + GFF1699 0.34 +0.3 345,720 - GFF1699 0.34 +0.0 345,720 - GFF1699 0.34 -1.2 345,720 - GFF1699 0.34 -0.1 345,720 - GFF1699 0.34 -0.7 345,720 - GFF1699 0.34 -0.1 345,720 - GFF1699 0.34 +0.8 345,720 - GFF1699 0.34 +0.8 345,720 - GFF1699 0.34 -0.6 345,720 - GFF1699 0.34 +0.4 345,863 + GFF1699 0.56 -1.6 345,864 - GFF1699 0.56 -0.1 346,115 + -1.0 346,115 + -0.8 346,115 + -0.1 346,189 + +2.2 346,189 + +1.0 346,189 + -0.2 346,189 + +0.0 346,189 + -0.2 346,190 - -0.0 346,190 - -0.7 346,190 - -0.2 346,190 - +1.5 346,190 - +0.1 346,190 - -0.4 346,262 + +0.0 346,262 + -0.4 346,263 - -0.1 346,263 - +0.8 346,263 - -1.9 346,383 + GFF1700 0.19 +0.3
Or see this region's nucleotide sequence