Experiment: M9 with calcium pantothenate 10 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF1130 and GFF1131 are separated by 13 nucleotides GFF1131 and GFF1132 are separated by 3 nucleotides GFF1132 and GFF1133 overlap by 23 nucleotides GFF1133 and GFF1134 are separated by 17 nucleotides
GFF1130 - Fatty acid hydroxylase family (carotene hydroxylase/sterol desaturase), at 446,742 to 447,476
GFF1130
GFF1131 - putative fatty acid desaturase, at 447,490 to 448,398
GFF1131
GFF1132 - 3-oxoacyl-[acyl-carrier-protein] synthase III (EC 2.3.1.41), at 448,402 to 450,327
GFF1132
GFF1133 - FIG00431745: hypothetical protein, at 450,305 to 451,222
GFF1133
GFF1134 - FIG00931167: hypothetical protein, at 451,240 to 451,611
GFF1134
Position (kb) 448
449
450
451 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 447.532 kb on + strand at 447.532 kb on + strand at 447.532 kb on + strand at 447.532 kb on + strand at 447.533 kb on - strand at 447.533 kb on - strand at 447.595 kb on + strand, within GFF1131 at 447.595 kb on + strand, within GFF1131 at 447.595 kb on + strand, within GFF1131 at 447.595 kb on + strand, within GFF1131 at 447.595 kb on + strand, within GFF1131 at 447.596 kb on - strand, within GFF1131 at 447.596 kb on - strand, within GFF1131 at 447.596 kb on - strand, within GFF1131 at 447.596 kb on - strand, within GFF1131 at 447.596 kb on - strand, within GFF1131 at 447.596 kb on - strand, within GFF1131 at 447.802 kb on + strand, within GFF1131 at 447.802 kb on + strand, within GFF1131 at 447.803 kb on - strand, within GFF1131 at 447.838 kb on + strand, within GFF1131 at 447.838 kb on + strand, within GFF1131 at 447.838 kb on + strand, within GFF1131 at 447.838 kb on + strand, within GFF1131 at 447.838 kb on + strand, within GFF1131 at 447.934 kb on + strand, within GFF1131 at 447.934 kb on + strand, within GFF1131 at 447.935 kb on - strand, within GFF1131 at 447.949 kb on + strand, within GFF1131 at 447.949 kb on + strand, within GFF1131 at 447.950 kb on - strand, within GFF1131 at 448.063 kb on + strand, within GFF1131 at 448.063 kb on + strand, within GFF1131 at 448.063 kb on + strand, within GFF1131 at 448.063 kb on + strand, within GFF1131 at 448.063 kb on + strand, within GFF1131 at 448.063 kb on + strand, within GFF1131 at 448.063 kb on + strand, within GFF1131 at 448.064 kb on - strand, within GFF1131 at 448.064 kb on - strand, within GFF1131 at 448.064 kb on - strand, within GFF1131 at 448.064 kb on - strand, within GFF1131 at 448.064 kb on - strand, within GFF1131 at 448.064 kb on - strand, within GFF1131 at 448.064 kb on - strand, within GFF1131 at 448.064 kb on - strand, within GFF1131 at 448.064 kb on - strand, within GFF1131 at 448.064 kb on - strand, within GFF1131 at 448.144 kb on + strand, within GFF1131 at 448.145 kb on - strand, within GFF1131 at 448.145 kb on - strand, within GFF1131 at 448.312 kb on + strand at 448.312 kb on + strand at 448.312 kb on + strand at 448.312 kb on + strand at 448.312 kb on + strand at 448.312 kb on + strand at 448.312 kb on + strand at 448.312 kb on + strand at 448.312 kb on + strand at 448.312 kb on + strand at 448.312 kb on + strand at 448.312 kb on + strand at 448.312 kb on + strand at 448.313 kb on - strand at 448.313 kb on - strand at 448.313 kb on - strand at 448.313 kb on - strand at 448.313 kb on - strand at 448.313 kb on - strand at 448.313 kb on - strand at 448.313 kb on - strand at 448.313 kb on - strand at 448.313 kb on - strand at 448.426 kb on + strand at 448.426 kb on + strand at 448.427 kb on - strand at 448.427 kb on - strand at 448.444 kb on + strand at 448.444 kb on + strand at 448.445 kb on - strand at 448.445 kb on - strand at 448.445 kb on - strand at 448.445 kb on - strand at 448.489 kb on + strand at 448.489 kb on + strand at 448.489 kb on + strand at 448.489 kb on + strand at 448.489 kb on + strand at 448.489 kb on + strand at 448.489 kb on + strand at 448.490 kb on - strand at 448.490 kb on - strand at 448.490 kb on - strand at 448.490 kb on - strand at 448.490 kb on - strand at 448.490 kb on - strand at 448.490 kb on - strand at 448.490 kb on - strand at 448.490 kb on - strand at 448.568 kb on - strand at 448.568 kb on - strand at 448.568 kb on - strand at 448.568 kb on - strand at 448.919 kb on - strand, within GFF1132 at 449.072 kb on - strand, within GFF1132 at 449.072 kb on - strand, within GFF1132 at 449.225 kb on - strand, within GFF1132 at 449.287 kb on + strand, within GFF1132 at 449.287 kb on + strand, within GFF1132 at 449.287 kb on + strand, within GFF1132 at 449.288 kb on - strand, within GFF1132 at 449.288 kb on - strand, within GFF1132 at 449.288 kb on - strand, within GFF1132 at 449.288 kb on - strand, within GFF1132 at 449.391 kb on + strand, within GFF1132 at 449.391 kb on + strand, within GFF1132 at 449.391 kb on + strand, within GFF1132 at 449.391 kb on + strand, within GFF1132 at 449.392 kb on - strand, within GFF1132 at 449.473 kb on + strand, within GFF1132 at 449.473 kb on + strand, within GFF1132 at 449.473 kb on + strand, within GFF1132 at 449.474 kb on - strand, within GFF1132 at 449.474 kb on - strand, within GFF1132 at 449.474 kb on - strand, within GFF1132 at 449.474 kb on - strand, within GFF1132 at 449.474 kb on - strand, within GFF1132 at 449.474 kb on - strand, within GFF1132 at 449.474 kb on - strand, within GFF1132 at 449.506 kb on + strand, within GFF1132 at 449.506 kb on + strand, within GFF1132 at 449.506 kb on + strand, within GFF1132 at 449.506 kb on + strand, within GFF1132 at 449.506 kb on + strand, within GFF1132 at 449.506 kb on + strand, within GFF1132 at 449.506 kb on + strand, within GFF1132 at 449.506 kb on + strand, within GFF1132 at 449.506 kb on + strand, within GFF1132 at 449.506 kb on + strand, within GFF1132 at 449.506 kb on + strand, within GFF1132 at 449.506 kb on + strand, within GFF1132 at 449.506 kb on + strand, within GFF1132 at 449.506 kb on + strand, within GFF1132 at 449.506 kb on + strand, within GFF1132 at 449.506 kb on + strand, within GFF1132 at 449.507 kb on - strand, within GFF1132 at 449.507 kb on - strand, within GFF1132 at 449.507 kb on - strand, within GFF1132 at 449.507 kb on - strand, within GFF1132 at 449.507 kb on - strand, within GFF1132 at 449.507 kb on - strand, within GFF1132 at 449.678 kb on - strand, within GFF1132 at 449.746 kb on + strand, within GFF1132 at 449.747 kb on - strand, within GFF1132 at 449.834 kb on - strand, within GFF1132 at 449.834 kb on - strand, within GFF1132 at 449.909 kb on - strand, within GFF1132 at 449.983 kb on + strand, within GFF1132 at 449.983 kb on + strand, within GFF1132 at 449.983 kb on + strand, within GFF1132 at 449.983 kb on + strand, within GFF1132 at 449.984 kb on - strand, within GFF1132 at 450.037 kb on + strand, within GFF1132 at 450.037 kb on + strand, within GFF1132 at 450.037 kb on + strand, within GFF1132 at 450.037 kb on + strand, within GFF1132 at 450.037 kb on + strand, within GFF1132 at 450.037 kb on + strand, within GFF1132 at 450.037 kb on + strand, within GFF1132 at 450.037 kb on + strand, within GFF1132 at 450.037 kb on + strand, within GFF1132 at 450.037 kb on + strand, within GFF1132 at 450.038 kb on - strand, within GFF1132 at 450.038 kb on - strand, within GFF1132 at 450.038 kb on - strand, within GFF1132 at 450.038 kb on - strand, within GFF1132 at 450.038 kb on - strand, within GFF1132 at 450.038 kb on - strand, within GFF1132 at 450.038 kb on - strand, within GFF1132 at 450.038 kb on - strand, within GFF1132 at 450.038 kb on - strand, within GFF1132 at 450.038 kb on - strand, within GFF1132 at 450.038 kb on - strand, within GFF1132 at 450.136 kb on + strand at 450.265 kb on + strand at 450.265 kb on + strand at 450.265 kb on + strand at 450.265 kb on + strand at 450.265 kb on + strand at 450.265 kb on + strand at 450.265 kb on + strand at 450.265 kb on + strand at 450.266 kb on - strand at 450.266 kb on - strand at 450.266 kb on - strand at 450.266 kb on - strand at 450.266 kb on - strand at 450.266 kb on - strand at 450.266 kb on - strand at 450.266 kb on - strand at 450.266 kb on - strand at 450.380 kb on + strand at 450.380 kb on + strand at 450.381 kb on - strand at 450.381 kb on - strand at 450.381 kb on - strand at 450.381 kb on - strand at 450.458 kb on + strand, within GFF1133 at 450.458 kb on + strand, within GFF1133 at 450.458 kb on + strand, within GFF1133 at 450.458 kb on + strand, within GFF1133 at 450.459 kb on - strand, within GFF1133 at 450.459 kb on - strand, within GFF1133 at 450.459 kb on - strand, within GFF1133 at 450.761 kb on + strand, within GFF1133 at 450.938 kb on + strand, within GFF1133 at 450.938 kb on + strand, within GFF1133 at 450.939 kb on - strand, within GFF1133 at 450.939 kb on - strand, within GFF1133 at 451.013 kb on + strand, within GFF1133 at 451.013 kb on + strand, within GFF1133 at 451.013 kb on + strand, within GFF1133 at 451.013 kb on + strand, within GFF1133 at 451.014 kb on - strand, within GFF1133 at 451.014 kb on - strand, within GFF1133 at 451.014 kb on - strand, within GFF1133 at 451.014 kb on - strand, within GFF1133 at 451.014 kb on - strand, within GFF1133 at 451.014 kb on - strand, within GFF1133 at 451.014 kb on - strand, within GFF1133 at 451.203 kb on - strand at 451.203 kb on - strand at 451.203 kb on - strand at 451.203 kb on - strand at 451.203 kb on - strand at 451.220 kb on + strand at 451.220 kb on + strand at 451.220 kb on + strand at 451.220 kb on + strand at 451.221 kb on - strand at 451.221 kb on - strand at 451.221 kb on - strand at 451.221 kb on - strand at 451.221 kb on - strand at 451.221 kb on - strand at 451.221 kb on - strand at 451.221 kb on - strand at 451.226 kb on + strand at 451.226 kb on + strand at 451.226 kb on + strand at 451.226 kb on + strand at 451.226 kb on + strand at 451.226 kb on + strand at 451.226 kb on + strand at 451.226 kb on + strand at 451.226 kb on + strand at 451.226 kb on + strand at 451.226 kb on + strand at 451.226 kb on + strand at 451.226 kb on + strand at 451.226 kb on + strand at 451.226 kb on + strand at 451.226 kb on + strand at 451.226 kb on + strand at 451.226 kb on + strand at 451.226 kb on + strand at 451.226 kb on + strand at 451.226 kb on + strand at 451.226 kb on + strand at 451.226 kb on + strand at 451.226 kb on + strand at 451.227 kb on - strand at 451.227 kb on - strand at 451.227 kb on - strand at 451.227 kb on - strand at 451.227 kb on - strand at 451.227 kb on - strand at 451.227 kb on - strand at 451.227 kb on - strand at 451.227 kb on - strand at 451.227 kb on - strand at 451.227 kb on - strand at 451.227 kb on - strand at 451.227 kb on - strand at 451.227 kb on - strand at 451.227 kb on - strand at 451.227 kb on - strand at 451.227 kb on - strand at 451.227 kb on - strand at 451.227 kb on - strand at 451.227 kb on - strand at 451.227 kb on - strand at 451.227 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with calcium pantothenate 10 mg/mL remove 447,532 + -1.4 447,532 + -0.2 447,532 + +0.5 447,532 + -0.2 447,533 - -0.9 447,533 - +1.1 447,595 + GFF1131 0.12 +0.1 447,595 + GFF1131 0.12 +0.8 447,595 + GFF1131 0.12 +0.4 447,595 + GFF1131 0.12 +0.1 447,595 + GFF1131 0.12 -0.3 447,596 - GFF1131 0.12 -1.8 447,596 - GFF1131 0.12 -0.3 447,596 - GFF1131 0.12 -1.1 447,596 - GFF1131 0.12 -2.6 447,596 - GFF1131 0.12 -1.6 447,596 - GFF1131 0.12 -0.8 447,802 + GFF1131 0.34 -0.2 447,802 + GFF1131 0.34 -0.6 447,803 - GFF1131 0.34 -0.3 447,838 + GFF1131 0.38 +0.4 447,838 + GFF1131 0.38 +0.5 447,838 + GFF1131 0.38 -0.0 447,838 + GFF1131 0.38 -1.8 447,838 + GFF1131 0.38 -0.8 447,934 + GFF1131 0.49 +0.2 447,934 + GFF1131 0.49 -1.4 447,935 - GFF1131 0.49 +0.1 447,949 + GFF1131 0.50 +0.4 447,949 + GFF1131 0.50 -0.9 447,950 - GFF1131 0.51 -1.4 448,063 + GFF1131 0.63 +0.6 448,063 + GFF1131 0.63 -0.3 448,063 + GFF1131 0.63 +0.5 448,063 + GFF1131 0.63 +0.1 448,063 + GFF1131 0.63 -1.0 448,063 + GFF1131 0.63 +1.1 448,063 + GFF1131 0.63 -0.9 448,064 - GFF1131 0.63 -0.5 448,064 - GFF1131 0.63 +0.7 448,064 - GFF1131 0.63 -0.1 448,064 - GFF1131 0.63 -0.2 448,064 - GFF1131 0.63 -0.4 448,064 - GFF1131 0.63 -0.3 448,064 - GFF1131 0.63 +0.0 448,064 - GFF1131 0.63 +0.1 448,064 - GFF1131 0.63 -0.4 448,064 - GFF1131 0.63 -1.3 448,144 + GFF1131 0.72 -0.9 448,145 - GFF1131 0.72 -0.4 448,145 - GFF1131 0.72 +0.0 448,312 + +0.1 448,312 + +0.6 448,312 + -1.6 448,312 + -0.9 448,312 + -0.5 448,312 + -0.4 448,312 + -0.1 448,312 + -0.3 448,312 + +0.6 448,312 + -0.4 448,312 + +0.1 448,312 + -0.4 448,312 + +1.2 448,313 - +0.4 448,313 - -0.7 448,313 - +0.0 448,313 - +0.4 448,313 - +2.7 448,313 - +0.2 448,313 - -0.2 448,313 - -1.2 448,313 - +1.0 448,313 - -0.6 448,426 + -2.6 448,426 + -2.0 448,427 - -0.2 448,427 - +0.4 448,444 + -0.0 448,444 + -1.7 448,445 - -1.2 448,445 - -1.0 448,445 - -0.4 448,445 - -0.2 448,489 + -0.0 448,489 + -0.2 448,489 + -0.2 448,489 + -1.3 448,489 + +1.1 448,489 + -1.9 448,489 + +0.1 448,490 - +0.4 448,490 - -0.9 448,490 - +0.4 448,490 - +0.5 448,490 - -0.9 448,490 - -0.3 448,490 - +0.8 448,490 - -0.0 448,490 - -0.3 448,568 - -1.7 448,568 - +0.6 448,568 - +0.6 448,568 - +0.4 448,919 - GFF1132 0.27 +0.4 449,072 - GFF1132 0.35 -0.8 449,072 - GFF1132 0.35 -0.3 449,225 - GFF1132 0.43 -1.1 449,287 + GFF1132 0.46 -1.4 449,287 + GFF1132 0.46 +0.3 449,287 + GFF1132 0.46 +1.6 449,288 - GFF1132 0.46 -0.1 449,288 - GFF1132 0.46 +0.3 449,288 - GFF1132 0.46 -0.2 449,288 - GFF1132 0.46 -1.1 449,391 + GFF1132 0.51 -3.0 449,391 + GFF1132 0.51 -0.5 449,391 + GFF1132 0.51 +2.0 449,391 + GFF1132 0.51 -0.2 449,392 - GFF1132 0.51 -0.1 449,473 + GFF1132 0.56 +0.3 449,473 + GFF1132 0.56 -0.2 449,473 + GFF1132 0.56 -0.1 449,474 - GFF1132 0.56 -2.7 449,474 - GFF1132 0.56 -1.3 449,474 - GFF1132 0.56 +0.1 449,474 - GFF1132 0.56 -0.2 449,474 - GFF1132 0.56 +2.0 449,474 - GFF1132 0.56 -0.5 449,474 - GFF1132 0.56 -0.8 449,506 + GFF1132 0.57 +0.2 449,506 + GFF1132 0.57 +0.2 449,506 + GFF1132 0.57 +0.4 449,506 + GFF1132 0.57 -0.2 449,506 + GFF1132 0.57 +0.0 449,506 + GFF1132 0.57 -0.5 449,506 + GFF1132 0.57 +0.7 449,506 + GFF1132 0.57 +1.1 449,506 + GFF1132 0.57 +0.1 449,506 + GFF1132 0.57 +0.8 449,506 + GFF1132 0.57 -0.7 449,506 + GFF1132 0.57 -1.8 449,506 + GFF1132 0.57 +0.1 449,506 + GFF1132 0.57 -0.5 449,506 + GFF1132 0.57 -0.2 449,506 + GFF1132 0.57 +2.4 449,507 - GFF1132 0.57 +0.6 449,507 - GFF1132 0.57 -0.3 449,507 - GFF1132 0.57 -0.8 449,507 - GFF1132 0.57 -0.2 449,507 - GFF1132 0.57 -0.4 449,507 - GFF1132 0.57 +0.6 449,678 - GFF1132 0.66 -0.3 449,746 + GFF1132 0.70 -1.4 449,747 - GFF1132 0.70 +1.4 449,834 - GFF1132 0.74 +0.8 449,834 - GFF1132 0.74 +0.2 449,909 - GFF1132 0.78 -0.1 449,983 + GFF1132 0.82 -0.2 449,983 + GFF1132 0.82 -0.8 449,983 + GFF1132 0.82 +1.6 449,983 + GFF1132 0.82 +0.6 449,984 - GFF1132 0.82 -1.2 450,037 + GFF1132 0.85 -0.7 450,037 + GFF1132 0.85 -3.7 450,037 + GFF1132 0.85 -1.4 450,037 + GFF1132 0.85 +0.0 450,037 + GFF1132 0.85 +0.1 450,037 + GFF1132 0.85 -1.4 450,037 + GFF1132 0.85 -0.1 450,037 + GFF1132 0.85 -0.5 450,037 + GFF1132 0.85 +0.2 450,037 + GFF1132 0.85 -0.5 450,038 - GFF1132 0.85 +0.0 450,038 - GFF1132 0.85 -0.1 450,038 - GFF1132 0.85 -0.9 450,038 - GFF1132 0.85 -0.2 450,038 - GFF1132 0.85 -0.8 450,038 - GFF1132 0.85 -0.4 450,038 - GFF1132 0.85 -1.6 450,038 - GFF1132 0.85 +0.3 450,038 - GFF1132 0.85 -0.6 450,038 - GFF1132 0.85 -0.4 450,038 - GFF1132 0.85 -0.1 450,136 + -0.1 450,265 + +0.2 450,265 + -0.2 450,265 + +0.2 450,265 + -0.1 450,265 + -0.2 450,265 + -0.2 450,265 + +1.1 450,265 + -0.3 450,266 - +0.3 450,266 - -0.2 450,266 - +0.2 450,266 - -0.0 450,266 - -0.7 450,266 - +0.8 450,266 - +0.2 450,266 - -0.5 450,266 - -0.4 450,380 + +0.2 450,380 + +0.2 450,381 - -1.6 450,381 - -0.2 450,381 - +0.0 450,381 - +0.1 450,458 + GFF1133 0.17 -0.7 450,458 + GFF1133 0.17 -0.4 450,458 + GFF1133 0.17 -0.3 450,458 + GFF1133 0.17 -0.8 450,459 - GFF1133 0.17 -0.8 450,459 - GFF1133 0.17 -0.4 450,459 - GFF1133 0.17 -0.3 450,761 + GFF1133 0.50 +0.2 450,938 + GFF1133 0.69 -2.3 450,938 + GFF1133 0.69 -0.4 450,939 - GFF1133 0.69 -0.5 450,939 - GFF1133 0.69 -1.3 451,013 + GFF1133 0.77 -1.2 451,013 + GFF1133 0.77 +0.2 451,013 + GFF1133 0.77 -0.5 451,013 + GFF1133 0.77 -0.4 451,014 - GFF1133 0.77 -0.8 451,014 - GFF1133 0.77 +0.2 451,014 - GFF1133 0.77 -0.2 451,014 - GFF1133 0.77 +2.4 451,014 - GFF1133 0.77 -0.3 451,014 - GFF1133 0.77 -1.0 451,014 - GFF1133 0.77 +0.4 451,203 - -1.6 451,203 - -2.6 451,203 - -0.4 451,203 - -0.8 451,203 - -0.7 451,220 + -0.6 451,220 + +0.2 451,220 + -0.8 451,220 + +0.9 451,221 - -0.4 451,221 - -0.4 451,221 - -2.5 451,221 - +0.6 451,221 - -1.1 451,221 - -0.3 451,221 - -0.0 451,221 - -2.0 451,226 + +0.4 451,226 + -1.4 451,226 + -2.4 451,226 + +0.9 451,226 + -0.2 451,226 + +0.4 451,226 + -1.4 451,226 + -1.3 451,226 + -0.7 451,226 + +0.6 451,226 + -0.1 451,226 + -0.2 451,226 + +0.1 451,226 + +1.5 451,226 + +0.2 451,226 + +0.8 451,226 + -0.2 451,226 + -0.3 451,226 + -1.1 451,226 + +0.5 451,226 + +0.0 451,226 + -0.7 451,226 + +0.1 451,226 + -0.8 451,227 - +0.3 451,227 - +0.2 451,227 - -1.3 451,227 - +1.0 451,227 - -0.6 451,227 - -2.2 451,227 - -0.4 451,227 - +0.2 451,227 - +1.2 451,227 - -0.4 451,227 - -2.4 451,227 - -0.2 451,227 - -0.3 451,227 - -0.9 451,227 - +0.6 451,227 - +0.6 451,227 - +0.5 451,227 - +0.3 451,227 - -0.2 451,227 - -1.1 451,227 - -0.0 451,227 - -0.1
Or see this region's nucleotide sequence