Strain Fitness in Variovorax sp. SCN45 around GFF840

Experiment: M9 with calcium pantothenate 10 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9 with calcium pantothenate 10 mg/mL
145,903	+		GFF839	0.53	-1.1
145,904	-		GFF839	0.53	-1.1
146,176	+		GFF839	0.67	-0.3
146,435	-		GFF839	0.80	-1.4
146,435	-		GFF839	0.80	-0.6
146,919	-		GFF840	0.39	+0.7
146,981	+		GFF840	0.62	+0.0
147,092	+				+0.7
147,092	+				-1.5
147,092	+				-0.3
147,503	+		GFF841	0.24	-1.2
147,504	-		GFF841	0.24	-1.3
147,504	-		GFF841	0.24	-0.1
147,527	+		GFF841	0.25	-0.5