Strain Fitness in Variovorax sp. SCN45 around GFF4336

Experiment: M9 with calcium pantothenate 10 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9 with calcium pantothenate 10 mg/mL
259,071	-		GFF4335	0.58	+0.6
259,122	-		GFF4335	0.63	+1.1
259,651	+				-1.2
259,814	-		GFF4336	0.23	-0.6
259,834	+		GFF4336	0.25	+1.0
259,834	+		GFF4336	0.25	+1.7
260,009	-		GFF4336	0.43	+0.7
260,622	-				-1.7
260,789	+		GFF4337	0.18	+0.3
260,790	-		GFF4337	0.18	-0.6
260,790	-		GFF4337	0.18	-0.3
261,171	-		GFF4337	0.59	+1.2
261,458	-		GFF4337	0.90	+0.7