Experiment: M9 with calcium pantothenate 10 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF872 and GFF873 overlap by 4 nucleotides GFF873 and GFF874 overlap by 4 nucleotides GFF874 and GFF875 are separated by 174 nucleotides GFF875 and GFF876 are separated by 104 nucleotides
GFF872 - Hemin ABC transporter, permease protein, at 181,428 to 182,420
GFF872
GFF873 - KEGG: iron complex transport system ATP-binding protein , at 182,417 to 183,151
GFF873
GFF874 - no description, at 183,148 to 184,188
GFF874
GFF875 - no description, at 184,363 to 184,743
GFF875
GFF876 - hypothetical protein, at 184,848 to 186,509
GFF876
Position (kb) 183
184
185 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 182.446 kb on - strand at 182.446 kb on - strand at 182.446 kb on - strand at 182.664 kb on - strand, within GFF873 at 183.084 kb on - strand at 183.084 kb on - strand at 183.317 kb on - strand, within GFF874 at 183.673 kb on + strand, within GFF874 at 183.674 kb on - strand, within GFF874 at 183.674 kb on - strand, within GFF874 at 183.850 kb on + strand, within GFF874 at 183.850 kb on + strand, within GFF874 at 183.851 kb on - strand, within GFF874 at 183.851 kb on - strand, within GFF874 at 183.917 kb on - strand, within GFF874 at 184.439 kb on - strand, within GFF875 at 184.439 kb on - strand, within GFF875 at 184.439 kb on - strand, within GFF875 at 184.525 kb on + strand, within GFF875 at 184.526 kb on - strand, within GFF875 at 184.741 kb on + strand at 184.927 kb on + strand at 185.075 kb on - strand, within GFF876 at 185.075 kb on - strand, within GFF876 at 185.185 kb on + strand, within GFF876 at 185.185 kb on + strand, within GFF876 at 185.185 kb on + strand, within GFF876 at 185.185 kb on + strand, within GFF876 at 185.185 kb on + strand, within GFF876 at 185.185 kb on + strand, within GFF876 at 185.186 kb on - strand, within GFF876 at 185.186 kb on - strand, within GFF876 at 185.186 kb on - strand, within GFF876 at 185.186 kb on - strand, within GFF876 at 185.186 kb on - strand, within GFF876
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with calcium pantothenate 10 mg/mL remove 182,446 - -0.0 182,446 - +0.8 182,446 - +0.0 182,664 - GFF873 0.34 -0.6 183,084 - +0.4 183,084 - -0.5 183,317 - GFF874 0.16 +0.6 183,673 + GFF874 0.50 -0.1 183,674 - GFF874 0.51 -0.1 183,674 - GFF874 0.51 -0.4 183,850 + GFF874 0.67 -0.0 183,850 + GFF874 0.67 +0.2 183,851 - GFF874 0.68 +0.1 183,851 - GFF874 0.68 +0.4 183,917 - GFF874 0.74 +1.5 184,439 - GFF875 0.20 +0.1 184,439 - GFF875 0.20 -1.1 184,439 - GFF875 0.20 -0.7 184,525 + GFF875 0.43 +0.3 184,526 - GFF875 0.43 +0.5 184,741 + +3.1 184,927 + +0.4 185,075 - GFF876 0.14 +0.2 185,075 - GFF876 0.14 +0.8 185,185 + GFF876 0.20 +0.5 185,185 + GFF876 0.20 -0.0 185,185 + GFF876 0.20 -0.8 185,185 + GFF876 0.20 -0.8 185,185 + GFF876 0.20 -2.0 185,185 + GFF876 0.20 +0.0 185,186 - GFF876 0.20 -1.0 185,186 - GFF876 0.20 +0.2 185,186 - GFF876 0.20 +0.5 185,186 - GFF876 0.20 -0.6 185,186 - GFF876 0.20 +0.5
Or see this region's nucleotide sequence