Strain Fitness in Variovorax sp. SCN45 around GFF612

Experiment: M9 with calcium pantothenate 10 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9 with calcium pantothenate 10 mg/mL
659,251	+		GFF611	0.15	-0.9
659,252	-		GFF611	0.15	-0.1
659,252	-		GFF611	0.15	-0.5
659,252	-		GFF611	0.15	+1.0
659,362	+		GFF611	0.27	+0.2
659,362	+		GFF611	0.27	-0.0
659,362	+		GFF611	0.27	-0.5
659,363	-		GFF611	0.27	-1.9
659,363	-		GFF611	0.27	-1.2
659,363	-		GFF611	0.27	+1.2
659,552	+		GFF611	0.47	+0.4
659,552	+		GFF611	0.47	-0.3
659,553	-		GFF611	0.47	-1.1
659,553	-		GFF611	0.47	-0.5
659,557	-		GFF611	0.48	-0.0
660,319	+		GFF612	0.21	-0.5
660,324	-		GFF612	0.21	-2.1
660,324	-		GFF612	0.21	+0.5
660,413	-		GFF612	0.31	-1.4
660,413	-		GFF612	0.31	-0.3
660,417	-		GFF612	0.31	-0.4
660,419	+		GFF612	0.31	-1.1
660,437	-		GFF612	0.33	+0.0
660,437	-		GFF612	0.33	-0.4
660,605	-		GFF612	0.51	-0.5
660,605	-		GFF612	0.51	-0.7
660,705	-		GFF612	0.61	-1.2
660,706	+		GFF612	0.62	-1.6
660,706	+		GFF612	0.62	+0.1
660,707	-		GFF612	0.62	-0.5
661,210	+				-0.9
661,210	+				-0.0
661,210	+				-0.2
661,210	+				+1.1
661,210	+				-0.6
661,211	-				+0.8
661,211	-				+0.3
661,211	-				+0.3
661,211	-				-0.9
661,351	-		GFF613	0.21	-0.2
661,351	-		GFF613	0.21	-0.6
661,351	-		GFF613	0.21	-1.1
661,395	+		GFF613	0.25	-1.8
661,396	-		GFF613	0.26	-1.1
661,443	+		GFF613	0.30	-1.2
661,443	+		GFF613	0.30	+0.1
661,444	-		GFF613	0.31	-0.1
661,444	-		GFF613	0.31	+0.4
661,446	+		GFF613	0.31	-0.4
661,446	+		GFF613	0.31	+0.5
661,447	-		GFF613	0.31	-0.4
661,548	-		GFF613	0.41	+0.4
661,605	+		GFF613	0.47	-0.6