Experiment: M9 with calcium pantothenate 10 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF5468 and GFF5469 are separated by 129 nucleotides GFF5469 and GFF5470 are separated by 7 nucleotides GFF5470 and GFF5471 are separated by 11 nucleotides
GFF5468 - FAD/FMN-containing dehydrogenase, at 97,775 to 99,157
GFF5468
GFF5469 - Hydroxymethylpyrimidine ABC transporter, transmembrane component, at 99,287 to 100,141
GFF5469
GFF5470 - ABC transporter, ATP-binding protein (cluster 1, maltose/g3p/polyamine/iron); ABC transporter, ATP-binding protein (cluster 10, nitrate/sulfonate/bicarbonate), at 100,149 to 100,952
GFF5470
GFF5471 - Creatinine amidohydrolase (EC 3.5.2.10), at 100,964 to 101,785
GFF5471
Position (kb) 99
100
101 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 98.358 kb on + strand, within GFF5468 at 98.358 kb on + strand, within GFF5468 at 98.358 kb on + strand, within GFF5468 at 98.358 kb on + strand, within GFF5468 at 98.358 kb on + strand, within GFF5468 at 98.358 kb on + strand, within GFF5468 at 98.358 kb on + strand, within GFF5468 at 98.358 kb on + strand, within GFF5468 at 98.359 kb on - strand, within GFF5468 at 98.359 kb on - strand, within GFF5468 at 98.359 kb on - strand, within GFF5468 at 98.359 kb on - strand, within GFF5468 at 98.359 kb on - strand, within GFF5468 at 98.361 kb on + strand, within GFF5468 at 98.361 kb on + strand, within GFF5468 at 98.451 kb on + strand, within GFF5468 at 98.538 kb on + strand, within GFF5468 at 98.886 kb on + strand, within GFF5468 at 98.886 kb on + strand, within GFF5468 at 98.886 kb on + strand, within GFF5468 at 98.886 kb on + strand, within GFF5468 at 98.886 kb on + strand, within GFF5468 at 98.886 kb on + strand, within GFF5468 at 98.887 kb on - strand, within GFF5468 at 98.887 kb on - strand, within GFF5468 at 98.887 kb on - strand, within GFF5468 at 98.887 kb on - strand, within GFF5468 at 98.887 kb on - strand, within GFF5468 at 98.887 kb on - strand, within GFF5468 at 99.033 kb on + strand at 99.033 kb on + strand at 99.033 kb on + strand at 99.033 kb on + strand at 99.034 kb on - strand at 99.034 kb on - strand at 99.144 kb on + strand at 99.145 kb on - strand at 99.145 kb on - strand at 99.145 kb on - strand at 99.145 kb on - strand at 99.237 kb on - strand at 99.288 kb on + strand at 99.288 kb on + strand at 99.289 kb on - strand at 99.289 kb on - strand at 99.549 kb on + strand, within GFF5469 at 99.549 kb on + strand, within GFF5469 at 99.550 kb on - strand, within GFF5469 at 99.550 kb on - strand, within GFF5469 at 99.550 kb on - strand, within GFF5469 at 99.550 kb on - strand, within GFF5469 at 99.576 kb on + strand, within GFF5469 at 99.576 kb on + strand, within GFF5469 at 99.577 kb on - strand, within GFF5469 at 99.577 kb on - strand, within GFF5469 at 99.606 kb on + strand, within GFF5469 at 99.606 kb on + strand, within GFF5469 at 99.606 kb on + strand, within GFF5469 at 99.606 kb on + strand, within GFF5469 at 99.607 kb on - strand, within GFF5469 at 99.607 kb on - strand, within GFF5469 at 99.607 kb on - strand, within GFF5469 at 99.607 kb on - strand, within GFF5469 at 99.607 kb on - strand, within GFF5469 at 99.607 kb on - strand, within GFF5469 at 99.732 kb on + strand, within GFF5469 at 99.732 kb on + strand, within GFF5469 at 99.732 kb on + strand, within GFF5469 at 99.732 kb on + strand, within GFF5469 at 99.733 kb on - strand, within GFF5469 at 99.733 kb on - strand, within GFF5469 at 99.733 kb on - strand, within GFF5469 at 99.733 kb on - strand, within GFF5469 at 99.733 kb on - strand, within GFF5469 at 99.733 kb on - strand, within GFF5469 at 99.733 kb on - strand, within GFF5469 at 99.733 kb on - strand, within GFF5469 at 99.733 kb on - strand, within GFF5469 at 99.972 kb on + strand, within GFF5469 at 99.972 kb on + strand, within GFF5469 at 99.972 kb on + strand, within GFF5469 at 99.972 kb on + strand, within GFF5469 at 99.972 kb on + strand, within GFF5469 at 99.972 kb on + strand, within GFF5469 at 99.973 kb on - strand, within GFF5469 at 99.973 kb on - strand, within GFF5469 at 99.973 kb on - strand, within GFF5469 at 99.973 kb on - strand, within GFF5469 at 99.973 kb on - strand, within GFF5469 at 99.973 kb on - strand, within GFF5469 at 99.973 kb on - strand, within GFF5469 at 99.973 kb on - strand, within GFF5469 at 99.973 kb on - strand, within GFF5469 at 99.973 kb on - strand, within GFF5469 at 99.973 kb on - strand, within GFF5469 at 99.973 kb on - strand, within GFF5469 at 100.219 kb on + strand at 100.219 kb on + strand at 100.220 kb on - strand at 100.256 kb on - strand, within GFF5470 at 100.330 kb on + strand, within GFF5470 at 100.330 kb on + strand, within GFF5470 at 100.330 kb on + strand, within GFF5470 at 100.331 kb on - strand, within GFF5470 at 100.331 kb on - strand, within GFF5470 at 100.331 kb on - strand, within GFF5470 at 100.331 kb on - strand, within GFF5470 at 100.342 kb on + strand, within GFF5470 at 100.342 kb on + strand, within GFF5470 at 100.343 kb on - strand, within GFF5470 at 100.343 kb on - strand, within GFF5470 at 100.537 kb on + strand, within GFF5470 at 100.538 kb on - strand, within GFF5470 at 100.538 kb on - strand, within GFF5470 at 100.965 kb on + strand at 100.966 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with calcium pantothenate 10 mg/mL remove 98,358 + GFF5468 0.42 -1.3 98,358 + GFF5468 0.42 -0.2 98,358 + GFF5468 0.42 -0.2 98,358 + GFF5468 0.42 -1.0 98,358 + GFF5468 0.42 +2.0 98,358 + GFF5468 0.42 +2.0 98,358 + GFF5468 0.42 -0.2 98,358 + GFF5468 0.42 +2.8 98,359 - GFF5468 0.42 -0.2 98,359 - GFF5468 0.42 -0.3 98,359 - GFF5468 0.42 +1.4 98,359 - GFF5468 0.42 -0.3 98,359 - GFF5468 0.42 -0.2 98,361 + GFF5468 0.42 -0.7 98,361 + GFF5468 0.42 -1.0 98,451 + GFF5468 0.49 -1.1 98,538 + GFF5468 0.55 -0.2 98,886 + GFF5468 0.80 -0.2 98,886 + GFF5468 0.80 +1.0 98,886 + GFF5468 0.80 +1.0 98,886 + GFF5468 0.80 -0.1 98,886 + GFF5468 0.80 -1.3 98,886 + GFF5468 0.80 +0.8 98,887 - GFF5468 0.80 +0.4 98,887 - GFF5468 0.80 +1.1 98,887 - GFF5468 0.80 -0.4 98,887 - GFF5468 0.80 -0.6 98,887 - GFF5468 0.80 -1.0 98,887 - GFF5468 0.80 -0.1 99,033 + +0.1 99,033 + +0.1 99,033 + -0.0 99,033 + +0.6 99,034 - +0.1 99,034 - -1.8 99,144 + +2.3 99,145 - -1.7 99,145 - +0.1 99,145 - -0.2 99,145 - -0.5 99,237 - -1.6 99,288 + +1.0 99,288 + -0.4 99,289 - -0.3 99,289 - -0.3 99,549 + GFF5469 0.31 -1.8 99,549 + GFF5469 0.31 +0.1 99,550 - GFF5469 0.31 -0.2 99,550 - GFF5469 0.31 -0.6 99,550 - GFF5469 0.31 -0.4 99,550 - GFF5469 0.31 -0.6 99,576 + GFF5469 0.34 -0.3 99,576 + GFF5469 0.34 -0.5 99,577 - GFF5469 0.34 -0.3 99,577 - GFF5469 0.34 +1.3 99,606 + GFF5469 0.37 -0.3 99,606 + GFF5469 0.37 -0.6 99,606 + GFF5469 0.37 -0.0 99,606 + GFF5469 0.37 +0.7 99,607 - GFF5469 0.37 +0.2 99,607 - GFF5469 0.37 -0.6 99,607 - GFF5469 0.37 -1.1 99,607 - GFF5469 0.37 -0.8 99,607 - GFF5469 0.37 -0.9 99,607 - GFF5469 0.37 -0.0 99,732 + GFF5469 0.52 +0.8 99,732 + GFF5469 0.52 +0.3 99,732 + GFF5469 0.52 -0.4 99,732 + GFF5469 0.52 +0.9 99,733 - GFF5469 0.52 -0.3 99,733 - GFF5469 0.52 +0.7 99,733 - GFF5469 0.52 -0.8 99,733 - GFF5469 0.52 +0.5 99,733 - GFF5469 0.52 -0.8 99,733 - GFF5469 0.52 -1.5 99,733 - GFF5469 0.52 +0.4 99,733 - GFF5469 0.52 -0.3 99,733 - GFF5469 0.52 -0.5 99,972 + GFF5469 0.80 -0.3 99,972 + GFF5469 0.80 +0.1 99,972 + GFF5469 0.80 +0.3 99,972 + GFF5469 0.80 -0.1 99,972 + GFF5469 0.80 -0.5 99,972 + GFF5469 0.80 -0.1 99,973 - GFF5469 0.80 -2.6 99,973 - GFF5469 0.80 +0.5 99,973 - GFF5469 0.80 +0.1 99,973 - GFF5469 0.80 -0.4 99,973 - GFF5469 0.80 -0.6 99,973 - GFF5469 0.80 +0.2 99,973 - GFF5469 0.80 -0.4 99,973 - GFF5469 0.80 +0.2 99,973 - GFF5469 0.80 +0.2 99,973 - GFF5469 0.80 -0.6 99,973 - GFF5469 0.80 +0.2 99,973 - GFF5469 0.80 +1.0 100,219 + -1.3 100,219 + +0.4 100,220 - -1.0 100,256 - GFF5470 0.13 +0.5 100,330 + GFF5470 0.23 +1.0 100,330 + GFF5470 0.23 -0.8 100,330 + GFF5470 0.23 +0.4 100,331 - GFF5470 0.23 -0.6 100,331 - GFF5470 0.23 -0.3 100,331 - GFF5470 0.23 -1.3 100,331 - GFF5470 0.23 -0.4 100,342 + GFF5470 0.24 -2.0 100,342 + GFF5470 0.24 +0.1 100,343 - GFF5470 0.24 -0.7 100,343 - GFF5470 0.24 +0.8 100,537 + GFF5470 0.48 +0.5 100,538 - GFF5470 0.48 -2.1 100,538 - GFF5470 0.48 +1.0 100,965 + +0.7 100,966 - -1.3
Or see this region's nucleotide sequence