Experiment: M9 with calcium pantothenate 10 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF2753 and GFF2754 are separated by 19 nucleotides GFF2754 and GFF2755 are separated by 210 nucleotides GFF2755 and GFF2756 overlap by 4 nucleotides GFF2756 and GFF2757 are separated by 36 nucleotides
GFF2753 - Enolase (EC 4.2.1.11), at 186,058 to 187,341
GFF2753
GFF2754 - Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage, at 187,361 to 187,639
GFF2754
GFF2755 - Ribosyl nicotinamide transporter, PnuC-like, at 187,850 to 188,395
GFF2755
GFF2756 - Ribosylnicotinamide kinase (EC 2.7.1.22), at 188,392 to 189,063
GFF2756
GFF2757 - hypothetical protein, at 189,100 to 190,071
GFF2757
Position (kb) 187
188
189 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 187.327 kb on + strand at 187.327 kb on + strand at 187.327 kb on + strand at 187.327 kb on + strand at 187.327 kb on + strand at 187.339 kb on + strand at 187.339 kb on + strand at 187.339 kb on + strand at 187.623 kb on + strand at 187.624 kb on - strand at 187.637 kb on + strand at 187.637 kb on + strand at 187.637 kb on + strand at 187.638 kb on - strand at 187.638 kb on - strand at 187.638 kb on - strand at 187.638 kb on - strand at 187.638 kb on - strand at 187.931 kb on + strand, within GFF2755 at 187.931 kb on + strand, within GFF2755 at 187.931 kb on + strand, within GFF2755 at 187.931 kb on + strand, within GFF2755 at 187.931 kb on + strand, within GFF2755 at 187.931 kb on + strand, within GFF2755 at 187.931 kb on + strand, within GFF2755 at 187.931 kb on + strand, within GFF2755 at 187.931 kb on + strand, within GFF2755 at 187.931 kb on + strand, within GFF2755 at 187.931 kb on + strand, within GFF2755 at 187.931 kb on + strand, within GFF2755 at 187.931 kb on + strand, within GFF2755 at 187.932 kb on - strand, within GFF2755 at 187.932 kb on - strand, within GFF2755 at 187.932 kb on - strand, within GFF2755 at 187.932 kb on - strand, within GFF2755 at 187.932 kb on - strand, within GFF2755 at 187.932 kb on - strand, within GFF2755 at 187.932 kb on - strand, within GFF2755 at 187.961 kb on + strand, within GFF2755 at 187.961 kb on + strand, within GFF2755 at 187.962 kb on - strand, within GFF2755 at 187.962 kb on - strand, within GFF2755 at 187.962 kb on - strand, within GFF2755 at 188.318 kb on + strand, within GFF2755 at 188.318 kb on + strand, within GFF2755 at 188.319 kb on - strand, within GFF2755 at 188.319 kb on - strand, within GFF2755 at 188.319 kb on - strand, within GFF2755 at 188.319 kb on - strand, within GFF2755 at 188.351 kb on + strand at 188.351 kb on + strand at 188.352 kb on - strand at 188.524 kb on + strand, within GFF2756 at 188.524 kb on + strand, within GFF2756 at 188.524 kb on + strand, within GFF2756 at 188.524 kb on + strand, within GFF2756 at 188.525 kb on - strand, within GFF2756 at 188.672 kb on - strand, within GFF2756 at 188.672 kb on - strand, within GFF2756 at 188.672 kb on - strand, within GFF2756 at 188.704 kb on + strand, within GFF2756 at 188.704 kb on + strand, within GFF2756 at 188.704 kb on + strand, within GFF2756 at 188.705 kb on - strand, within GFF2756 at 188.735 kb on - strand, within GFF2756 at 188.735 kb on - strand, within GFF2756 at 189.027 kb on + strand at 189.027 kb on + strand at 189.027 kb on + strand at 189.027 kb on + strand at 189.027 kb on + strand at 189.027 kb on + strand at 189.027 kb on + strand at 189.027 kb on + strand at 189.027 kb on + strand at 189.027 kb on + strand at 189.027 kb on + strand at 189.027 kb on + strand at 189.027 kb on + strand at 189.027 kb on + strand at 189.028 kb on - strand at 189.028 kb on - strand at 189.028 kb on - strand at 189.028 kb on - strand at 189.028 kb on - strand at 189.028 kb on - strand at 189.028 kb on - strand at 189.028 kb on - strand at 189.028 kb on - strand at 189.028 kb on - strand at 189.028 kb on - strand at 189.028 kb on - strand at 189.028 kb on - strand at 189.028 kb on - strand at 189.028 kb on - strand at 189.028 kb on - strand at 189.028 kb on - strand at 189.028 kb on - strand at 189.028 kb on - strand at 189.061 kb on + strand at 189.061 kb on + strand at 189.148 kb on - strand at 189.148 kb on - strand at 189.316 kb on + strand, within GFF2757 at 189.316 kb on + strand, within GFF2757 at 189.317 kb on - strand, within GFF2757 at 189.317 kb on - strand, within GFF2757 at 189.317 kb on - strand, within GFF2757 at 189.317 kb on - strand, within GFF2757 at 189.317 kb on - strand, within GFF2757
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with calcium pantothenate 10 mg/mL remove 187,327 + -0.3 187,327 + -0.6 187,327 + -1.5 187,327 + -0.3 187,327 + -0.2 187,339 + +0.2 187,339 + +0.5 187,339 + +0.2 187,623 + -2.2 187,624 - +2.3 187,637 + -0.9 187,637 + -0.2 187,637 + -1.2 187,638 - +0.0 187,638 - +0.2 187,638 - -0.6 187,638 - +0.5 187,638 - +0.2 187,931 + GFF2755 0.15 +0.0 187,931 + GFF2755 0.15 +0.7 187,931 + GFF2755 0.15 +0.3 187,931 + GFF2755 0.15 -0.4 187,931 + GFF2755 0.15 +1.1 187,931 + GFF2755 0.15 +0.4 187,931 + GFF2755 0.15 -0.0 187,931 + GFF2755 0.15 +0.1 187,931 + GFF2755 0.15 +0.9 187,931 + GFF2755 0.15 -0.7 187,931 + GFF2755 0.15 -0.7 187,931 + GFF2755 0.15 +0.5 187,931 + GFF2755 0.15 -0.8 187,932 - GFF2755 0.15 +0.5 187,932 - GFF2755 0.15 +0.2 187,932 - GFF2755 0.15 -0.9 187,932 - GFF2755 0.15 +0.7 187,932 - GFF2755 0.15 +0.3 187,932 - GFF2755 0.15 -1.7 187,932 - GFF2755 0.15 -0.8 187,961 + GFF2755 0.20 +2.0 187,961 + GFF2755 0.20 -0.1 187,962 - GFF2755 0.21 -1.3 187,962 - GFF2755 0.21 -0.5 187,962 - GFF2755 0.21 -0.2 188,318 + GFF2755 0.86 -0.0 188,318 + GFF2755 0.86 -1.3 188,319 - GFF2755 0.86 -0.3 188,319 - GFF2755 0.86 +0.3 188,319 - GFF2755 0.86 -0.4 188,319 - GFF2755 0.86 -1.2 188,351 + -0.5 188,351 + -0.4 188,352 - +1.5 188,524 + GFF2756 0.20 +0.0 188,524 + GFF2756 0.20 -0.1 188,524 + GFF2756 0.20 +0.7 188,524 + GFF2756 0.20 +0.5 188,525 - GFF2756 0.20 +0.7 188,672 - GFF2756 0.42 +1.4 188,672 - GFF2756 0.42 +0.1 188,672 - GFF2756 0.42 +1.1 188,704 + GFF2756 0.46 +0.2 188,704 + GFF2756 0.46 -0.7 188,704 + GFF2756 0.46 -0.6 188,705 - GFF2756 0.47 -3.0 188,735 - GFF2756 0.51 +1.3 188,735 - GFF2756 0.51 -0.8 189,027 + +0.2 189,027 + -0.1 189,027 + -0.4 189,027 + -0.8 189,027 + +0.5 189,027 + -0.3 189,027 + -0.1 189,027 + +1.7 189,027 + -0.1 189,027 + -0.5 189,027 + -1.1 189,027 + +0.7 189,027 + -1.0 189,027 + -0.1 189,028 - +0.3 189,028 - +0.7 189,028 - -0.8 189,028 - -1.1 189,028 - -0.3 189,028 - -1.1 189,028 - +0.5 189,028 - +0.5 189,028 - -0.3 189,028 - +0.8 189,028 - -0.2 189,028 - -0.9 189,028 - -2.9 189,028 - +0.3 189,028 - -0.3 189,028 - -0.5 189,028 - +0.9 189,028 - +0.9 189,028 - -0.3 189,061 + -0.3 189,061 + +1.9 189,148 - +0.5 189,148 - -1.0 189,316 + GFF2757 0.22 +0.3 189,316 + GFF2757 0.22 -0.2 189,317 - GFF2757 0.22 -0.3 189,317 - GFF2757 0.22 +1.1 189,317 - GFF2757 0.22 +0.7 189,317 - GFF2757 0.22 +0.7 189,317 - GFF2757 0.22 +0.7
Or see this region's nucleotide sequence