Strain Fitness in Variovorax sp. SCN45 around GFF2637

Experiment: M9 with calcium pantothenate 10 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9 with calcium pantothenate 10 mg/mL
49,836	-		GFF2636	0.48	+0.4
49,841	+		GFF2636	0.48	-0.5
49,841	+		GFF2636	0.48	+0.5
49,841	+		GFF2636	0.48	-0.8
49,842	-		GFF2636	0.48	+0.1
49,842	-		GFF2636	0.48	-0.7
49,842	-		GFF2636	0.48	-1.3
50,606	+		GFF2636	0.89	+0.5
50,704	+				-0.3
50,704	+				-0.3
50,705	-				-0.2
50,705	-				+2.1
51,026	-		GFF2637	0.50	+0.2
51,550	-		GFF2638	0.27	-1.9
51,550	-		GFF2638	0.27	+0.1
51,550	-		GFF2638	0.27	-0.5
51,550	-		GFF2638	0.27	+0.6
52,025	+		GFF2638	0.69	-2.1
52,025	+		GFF2638	0.69	-0.5
52,026	-		GFF2638	0.69	+0.5
52,026	-		GFF2638	0.69	-0.2
52,026	-		GFF2638	0.69	+0.9
52,026	-		GFF2638	0.69	+0.1
52,158	+		GFF2638	0.81	-0.8
52,159	-		GFF2638	0.81	-1.1
52,159	-		GFF2638	0.81	+0.3
52,167	+		GFF2638	0.82	-0.6
52,167	+		GFF2638	0.82	+0.1
52,167	+		GFF2638	0.82	-1.1
52,168	-		GFF2638	0.82	+0.7
52,168	-		GFF2638	0.82	+0.9