Strain Fitness in Escherichia coli ECRC62 around BNILDI_11810

Experiment: JK38

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	JK38
2,366,357	-	tapT	BNILDI_11800	0.58	+0.9
2,366,425	-	tapT	BNILDI_11800	0.67	-0.1
2,366,448	+	tapT	BNILDI_11800	0.71	-0.5
2,366,533	+	tapT	BNILDI_11800	0.83	+1.7
2,366,533	+	tapT	BNILDI_11800	0.83	+0.9
2,366,534	-	tapT	BNILDI_11800	0.83	+0.0
2,366,534	-	tapT	BNILDI_11800	0.83	-0.4
2,366,534	-	tapT	BNILDI_11800	0.83	-0.1
2,366,774	+	trxC	BNILDI_11805	0.13	+0.2
2,366,822	+	trxC	BNILDI_11805	0.24	-0.2
2,366,823	-	trxC	BNILDI_11805	0.24	-0.7
2,366,826	-	trxC	BNILDI_11805	0.25	+0.7
2,366,982	+	trxC	BNILDI_11805	0.62	+0.8
2,366,983	-	trxC	BNILDI_11805	0.62	-0.3
2,366,983	-	trxC	BNILDI_11805	0.62	+0.9
2,366,983	-	trxC	BNILDI_11805	0.62	+0.4
2,367,134	+				-0.6
2,367,145	-				+0.5
2,367,145	-				+0.9
2,367,244	+				+0.1
2,367,251	+				+0.0
2,367,251	+				+0.0
2,367,252	-				+0.5
2,367,255	+				-0.3
2,367,255	+				-0.5
2,367,256	-				+0.9
2,367,260	+				-0.8
2,367,260	+				-0.4
2,367,261	-				+0.7
2,367,368	-				-0.7
2,367,392	+				+0.8
2,367,392	+				+0.1
2,367,392	+				+0.8
2,367,393	-				-1.1
2,367,393	-				-0.7
2,367,393	-				-0.4
2,367,393	-				+0.6
2,367,425	-				+1.2
2,367,629	-	yfiF	BNILDI_11810	0.27	+1.0
2,367,767	-	yfiF	BNILDI_11810	0.40	-0.4
2,367,806	+	yfiF	BNILDI_11810	0.44	-0.9
2,367,895	+	yfiF	BNILDI_11810	0.53	+0.5
2,367,895	+	yfiF	BNILDI_11810	0.53	-0.3
2,367,974	-	yfiF	BNILDI_11810	0.60	+0.9
2,368,154	+	yfiF	BNILDI_11810	0.78	+1.6
2,368,154	+	yfiF	BNILDI_11810	0.78	-0.7
2,368,162	-	yfiF	BNILDI_11810	0.79	-0.5
2,368,244	+	yfiF	BNILDI_11810	0.86	+0.2
2,368,244	+	yfiF	BNILDI_11810	0.86	-0.5
2,368,327	+				-0.8
2,368,453	+				-0.0
2,368,453	+				+0.1
2,368,576	+	ung	BNILDI_11815	0.21	-0.3
2,368,576	+	ung	BNILDI_11815	0.21	+1.7
2,368,593	+	ung	BNILDI_11815	0.23	-1.5
2,368,593	+	ung	BNILDI_11815	0.23	+0.4
2,368,593	+	ung	BNILDI_11815	0.23	-0.6
2,368,594	-	ung	BNILDI_11815	0.23	-0.5
2,368,597	+	ung	BNILDI_11815	0.24	-0.8
2,368,598	-	ung	BNILDI_11815	0.24	+1.4
2,368,598	-	ung	BNILDI_11815	0.24	-1.8
2,368,683	+	ung	BNILDI_11815	0.36	-1.8
2,368,684	-	ung	BNILDI_11815	0.37	+0.1
2,368,753	-	ung	BNILDI_11815	0.47	-0.3
2,368,753	-	ung	BNILDI_11815	0.47	-0.4
2,368,793	+	ung	BNILDI_11815	0.52	+0.2
2,368,793	+	ung	BNILDI_11815	0.52	-0.4
2,368,842	+	ung	BNILDI_11815	0.59	+0.5
2,368,843	-	ung	BNILDI_11815	0.60	+0.3
2,368,843	-	ung	BNILDI_11815	0.60	-0.4
2,368,844	+	ung	BNILDI_11815	0.60	-0.1
2,368,844	+	ung	BNILDI_11815	0.60	+0.4
2,368,845	-	ung	BNILDI_11815	0.60	-0.2
2,368,845	-	ung	BNILDI_11815	0.60	-0.3
2,368,845	-	ung	BNILDI_11815	0.60	-0.1
2,368,848	+	ung	BNILDI_11815	0.60	-1.9
2,368,848	+	ung	BNILDI_11815	0.60	+0.7
2,368,848	+	ung	BNILDI_11815	0.60	-0.1
2,368,849	-	ung	BNILDI_11815	0.60	-1.0
2,369,009	+	ung	BNILDI_11815	0.84	-0.8
2,369,010	-	ung	BNILDI_11815	0.84	-1.3
2,369,013	+	ung	BNILDI_11815	0.84	-0.4
2,369,014	-	ung	BNILDI_11815	0.84	+0.6
2,369,014	-	ung	BNILDI_11815	0.84	-0.5
2,369,067	-				+0.7
2,369,108	-				-0.2
2,369,156	+				-0.1
2,369,171	-				-0.3
2,369,341	+				-0.1
2,369,342	-				+0.4
2,369,342	-				+0.1
2,369,342	-				-0.6
2,369,343	+				-0.4
2,369,343	+				+1.1
2,369,343	+				-1.0
2,369,343	+				-0.4
2,369,343	+				+0.7
2,369,343	+				+0.0
2,369,343	+				-0.3
2,369,343	+				-0.3
2,369,343	+				-1.2
2,369,343	+				+3.3
2,369,343	+				-1.0
2,369,343	+				+1.7
2,369,343	+				+2.0
2,369,343	+				+0.4
2,369,343	+				+1.3
2,369,343	+				-0.2
2,369,343	+				+0.4
2,369,344	-				-5.8
2,369,344	-				+0.1
2,369,344	-				+0.8
2,369,344	-				-0.0
2,369,344	-				-1.0
2,369,344	-				-0.6