Experiment: JK38
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt rbbA and yhiI overlap by 4 nucleotides yhiI and yhiJ are separated by 365 nucleotides
BNILDI_03150: rbbA - ribosome-associated ATPase/putative transporter RbbA, at 606,551 to 609,286
rbbA
BNILDI_03155: yhiI - Uncharacterized protein YhiI, at 609,283 to 610,350
yhiI
BNILDI_03160: yhiJ - Uncharacterized protein YhiJ, at 610,716 to 612,338
yhiJ
Position (kb) 609
610
611 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 608.540 kb on + strand, within rbbA at 608.541 kb on - strand, within rbbA at 608.543 kb on - strand, within rbbA at 608.583 kb on - strand, within rbbA at 608.662 kb on + strand, within rbbA at 608.663 kb on - strand, within rbbA at 608.664 kb on + strand, within rbbA at 608.664 kb on + strand, within rbbA at 608.665 kb on - strand, within rbbA at 608.665 kb on - strand, within rbbA at 608.690 kb on - strand, within rbbA at 608.690 kb on - strand, within rbbA at 608.710 kb on + strand, within rbbA at 608.711 kb on - strand, within rbbA at 608.876 kb on + strand, within rbbA at 608.902 kb on + strand, within rbbA at 608.903 kb on - strand, within rbbA at 608.903 kb on - strand, within rbbA at 609.125 kb on + strand at 609.125 kb on + strand at 609.169 kb on + strand at 609.193 kb on + strand at 609.194 kb on - strand at 609.194 kb on - strand at 609.194 kb on - strand at 609.196 kb on + strand at 609.196 kb on + strand at 609.196 kb on + strand at 609.196 kb on + strand at 609.197 kb on - strand at 609.223 kb on - strand at 609.513 kb on + strand, within yhiI at 609.603 kb on + strand, within yhiI at 609.604 kb on - strand, within yhiI at 609.606 kb on - strand, within yhiI at 609.606 kb on - strand, within yhiI at 609.606 kb on - strand, within yhiI at 609.606 kb on - strand, within yhiI at 609.606 kb on - strand, within yhiI at 609.606 kb on - strand, within yhiI at 609.627 kb on + strand, within yhiI at 609.790 kb on - strand, within yhiI at 609.795 kb on + strand, within yhiI at 609.795 kb on + strand, within yhiI at 609.795 kb on + strand, within yhiI at 609.796 kb on - strand, within yhiI at 609.820 kb on - strand, within yhiI at 609.820 kb on - strand, within yhiI at 609.943 kb on - strand, within yhiI at 610.338 kb on + strand at 610.391 kb on + strand at 610.391 kb on + strand at 610.436 kb on + strand at 610.454 kb on + strand at 610.454 kb on + strand at 610.455 kb on - strand at 610.512 kb on + strand at 610.513 kb on - strand at 610.513 kb on - strand at 610.513 kb on - strand at 610.557 kb on + strand at 610.558 kb on - strand at 610.558 kb on - strand at 610.563 kb on + strand at 610.563 kb on + strand at 610.564 kb on - strand at 610.576 kb on + strand at 610.726 kb on - strand at 610.743 kb on - strand at 610.754 kb on + strand at 610.838 kb on + strand at 610.838 kb on + strand at 610.838 kb on + strand at 610.839 kb on - strand at 610.868 kb on + strand at 610.891 kb on - strand, within yhiJ at 610.911 kb on + strand, within yhiJ at 610.913 kb on + strand, within yhiJ at 610.913 kb on + strand, within yhiJ at 610.913 kb on + strand, within yhiJ at 610.914 kb on - strand, within yhiJ at 610.914 kb on - strand, within yhiJ at 610.938 kb on - strand, within yhiJ at 611.109 kb on - strand, within yhiJ at 611.176 kb on - strand, within yhiJ at 611.177 kb on + strand, within yhiJ at 611.257 kb on - strand, within yhiJ
Per-strain Table
Position Strand Gene LocusTag Fraction JK38 remove 608,540 + rbbA BNILDI_03150 0.73 +1.6 608,541 - rbbA BNILDI_03150 0.73 +0.8 608,543 - rbbA BNILDI_03150 0.73 +0.4 608,583 - rbbA BNILDI_03150 0.74 -0.4 608,662 + rbbA BNILDI_03150 0.77 +1.1 608,663 - rbbA BNILDI_03150 0.77 -0.4 608,664 + rbbA BNILDI_03150 0.77 -0.8 608,664 + rbbA BNILDI_03150 0.77 +0.1 608,665 - rbbA BNILDI_03150 0.77 +1.3 608,665 - rbbA BNILDI_03150 0.77 -0.6 608,690 - rbbA BNILDI_03150 0.78 -0.3 608,690 - rbbA BNILDI_03150 0.78 +1.4 608,710 + rbbA BNILDI_03150 0.79 -0.5 608,711 - rbbA BNILDI_03150 0.79 +0.1 608,876 + rbbA BNILDI_03150 0.85 +0.3 608,902 + rbbA BNILDI_03150 0.86 +0.1 608,903 - rbbA BNILDI_03150 0.86 -0.9 608,903 - rbbA BNILDI_03150 0.86 +0.0 609,125 + -0.6 609,125 + +1.3 609,169 + -0.2 609,193 + -0.6 609,194 - +0.8 609,194 - -1.2 609,194 - -0.3 609,196 + -0.2 609,196 + -0.2 609,196 + -0.2 609,196 + -0.3 609,197 - -0.6 609,223 - -0.3 609,513 + yhiI BNILDI_03155 0.22 -1.0 609,603 + yhiI BNILDI_03155 0.30 +2.8 609,604 - yhiI BNILDI_03155 0.30 +0.1 609,606 - yhiI BNILDI_03155 0.30 -1.4 609,606 - yhiI BNILDI_03155 0.30 +0.0 609,606 - yhiI BNILDI_03155 0.30 +0.3 609,606 - yhiI BNILDI_03155 0.30 -0.5 609,606 - yhiI BNILDI_03155 0.30 -0.1 609,606 - yhiI BNILDI_03155 0.30 +1.4 609,627 + yhiI BNILDI_03155 0.32 +1.1 609,790 - yhiI BNILDI_03155 0.47 -1.0 609,795 + yhiI BNILDI_03155 0.48 +1.4 609,795 + yhiI BNILDI_03155 0.48 +0.2 609,795 + yhiI BNILDI_03155 0.48 -0.6 609,796 - yhiI BNILDI_03155 0.48 -0.3 609,820 - yhiI BNILDI_03155 0.50 -0.7 609,820 - yhiI BNILDI_03155 0.50 +2.6 609,943 - yhiI BNILDI_03155 0.62 -0.2 610,338 + +0.1 610,391 + +0.2 610,391 + -0.4 610,436 + +0.1 610,454 + +0.3 610,454 + -1.2 610,455 - -0.2 610,512 + -0.4 610,513 - -1.5 610,513 - +0.7 610,513 - -1.8 610,557 + -0.6 610,558 - +0.8 610,558 - +0.8 610,563 + +0.0 610,563 + +0.1 610,564 - -0.5 610,576 + +0.8 610,726 - +0.3 610,743 - +0.7 610,754 + -0.8 610,838 + -0.2 610,838 + +0.6 610,838 + -0.8 610,839 - -1.1 610,868 + -0.8 610,891 - yhiJ BNILDI_03160 0.11 -0.2 610,911 + yhiJ BNILDI_03160 0.12 -0.1 610,913 + yhiJ BNILDI_03160 0.12 -2.6 610,913 + yhiJ BNILDI_03160 0.12 -0.4 610,913 + yhiJ BNILDI_03160 0.12 -1.4 610,914 - yhiJ BNILDI_03160 0.12 +0.0 610,914 - yhiJ BNILDI_03160 0.12 -0.6 610,938 - yhiJ BNILDI_03160 0.14 -0.7 611,109 - yhiJ BNILDI_03160 0.24 -1.6 611,176 - yhiJ BNILDI_03160 0.28 +1.0 611,177 + yhiJ BNILDI_03160 0.28 -0.6 611,257 - yhiJ BNILDI_03160 0.33 -0.9
Or see this region's nucleotide sequence