Strain Fitness in Variovorax sp. SCN45 around GFF859

Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
164,717	-		GFF857	0.70	+1.4
164,722	+		GFF857	0.70	+0.1
165,014	+				-0.3
165,015	-				-0.9
165,572	+		GFF858	0.90	-0.6
165,573	-				+0.6
165,694	+		GFF859	0.14	-0.1
165,922	+		GFF859	0.72	-1.1
165,922	+		GFF859	0.72	-0.5
165,923	-		GFF859	0.72	-1.1
165,923	-		GFF859	0.72	-0.3
166,019	-				-0.1
166,019	-				+0.0
166,172	+				-1.2
166,173	-				+0.4
166,422	+				-0.6
166,422	+				+0.2
166,455	+		GFF860	0.10	-0.4
166,456	-		GFF860	0.10	+0.4
166,566	+		GFF860	0.16	-0.3
166,567	-		GFF860	0.16	-1.1
166,716	+		GFF860	0.24	+0.4