Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF855 and GFF856 are separated by 9 nucleotides GFF856 and GFF857 are separated by 22 nucleotides GFF857 and GFF858 are separated by 152 nucleotides GFF858 and GFF859 are separated by 16 nucleotides
GFF855 - Palmitoyl-CoA hydrolase( EC:3.1.2.2 ), at 162,899 to 163,588
GFF855
GFF856 - no description, at 163,598 to 164,095
GFF856
GFF857 - no description, at 164,118 to 164,975
GFF857
GFF858 - Copper tolerance protein, at 165,128 to 165,622
GFF858
GFF859 - Lactoylglutathione lyase (EC 4.4.1.5), at 165,639 to 166,031
GFF859
Position (kb) 164
165 Strain fitness (log2 ratio) -2
-1
0
1 at 163.254 kb on + strand, within GFF855 at 163.254 kb on + strand, within GFF855 at 163.255 kb on - strand, within GFF855 at 163.347 kb on + strand, within GFF855 at 163.347 kb on + strand, within GFF855 at 163.347 kb on + strand, within GFF855 at 163.347 kb on + strand, within GFF855 at 163.347 kb on + strand, within GFF855 at 163.348 kb on - strand, within GFF855 at 163.348 kb on - strand, within GFF855 at 163.540 kb on - strand at 163.560 kb on + strand at 163.599 kb on + strand at 163.600 kb on - strand at 163.728 kb on + strand, within GFF856 at 163.729 kb on - strand, within GFF856 at 163.790 kb on - strand, within GFF856 at 163.891 kb on - strand, within GFF856 at 164.212 kb on + strand, within GFF857 at 164.218 kb on + strand, within GFF857 at 164.218 kb on + strand, within GFF857 at 164.218 kb on + strand, within GFF857 at 164.218 kb on + strand, within GFF857 at 164.218 kb on + strand, within GFF857 at 164.218 kb on + strand, within GFF857 at 164.218 kb on + strand, within GFF857 at 164.219 kb on - strand, within GFF857 at 164.219 kb on - strand, within GFF857 at 164.219 kb on - strand, within GFF857 at 164.222 kb on + strand, within GFF857 at 164.223 kb on - strand, within GFF857 at 164.624 kb on - strand, within GFF857 at 164.624 kb on - strand, within GFF857 at 164.717 kb on - strand, within GFF857 at 164.722 kb on + strand, within GFF857 at 165.014 kb on + strand at 165.015 kb on - strand at 165.572 kb on + strand, within GFF858 at 165.573 kb on - strand at 165.694 kb on + strand, within GFF859 at 165.922 kb on + strand, within GFF859 at 165.922 kb on + strand, within GFF859 at 165.923 kb on - strand, within GFF859 at 165.923 kb on - strand, within GFF859
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL remove 163,254 + GFF855 0.51 +0.3 163,254 + GFF855 0.51 -0.9 163,255 - GFF855 0.52 -0.2 163,347 + GFF855 0.65 +0.3 163,347 + GFF855 0.65 +0.7 163,347 + GFF855 0.65 -0.9 163,347 + GFF855 0.65 +1.7 163,347 + GFF855 0.65 +0.1 163,348 - GFF855 0.65 -0.4 163,348 - GFF855 0.65 +1.7 163,540 - -0.2 163,560 + +0.2 163,599 + +0.7 163,600 - -0.3 163,728 + GFF856 0.26 -0.6 163,729 - GFF856 0.26 -0.4 163,790 - GFF856 0.39 -0.7 163,891 - GFF856 0.59 -0.2 164,212 + GFF857 0.11 +0.3 164,218 + GFF857 0.12 -0.3 164,218 + GFF857 0.12 -0.3 164,218 + GFF857 0.12 -0.5 164,218 + GFF857 0.12 +0.1 164,218 + GFF857 0.12 +1.0 164,218 + GFF857 0.12 +0.2 164,218 + GFF857 0.12 -1.6 164,219 - GFF857 0.12 +1.0 164,219 - GFF857 0.12 -1.4 164,219 - GFF857 0.12 +0.4 164,222 + GFF857 0.12 +0.1 164,223 - GFF857 0.12 +0.6 164,624 - GFF857 0.59 +0.8 164,624 - GFF857 0.59 -2.1 164,717 - GFF857 0.70 +1.4 164,722 + GFF857 0.70 +0.1 165,014 + -0.3 165,015 - -0.9 165,572 + GFF858 0.90 -0.6 165,573 - +0.6 165,694 + GFF859 0.14 -0.1 165,922 + GFF859 0.72 -1.1 165,922 + GFF859 0.72 -0.5 165,923 - GFF859 0.72 -1.1 165,923 - GFF859 0.72 -0.3
Or see this region's nucleotide sequence