Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF7052 and GFF7053 are separated by 134 nucleotides GFF7053 and GFF7054 are separated by 0 nucleotides GFF7054 and GFF7055 are separated by 82 nucleotides
GFF7052 - Uncharacterized MFS-type transporter, at 12,167 to 13,489
GFF7052
GFF7053 - Transcriptional regulator, LysR family, at 13,624 to 14,526
GFF7053
GFF7054 - Glutathione S-transferase domain protein, at 14,527 to 15,174
GFF7054
GFF7055 - hypothetical protein, at 15,257 to 16,135
GFF7055
Position (kb) 13
14
15 Strain fitness (log2 ratio) -2
-1
0
1
2 at 12.690 kb on + strand, within GFF7052 at 12.691 kb on - strand, within GFF7052 at 12.691 kb on - strand, within GFF7052 at 12.691 kb on - strand, within GFF7052 at 12.691 kb on - strand, within GFF7052 at 12.691 kb on - strand, within GFF7052 at 12.702 kb on + strand, within GFF7052 at 12.702 kb on + strand, within GFF7052 at 12.702 kb on + strand, within GFF7052 at 12.702 kb on + strand, within GFF7052 at 12.703 kb on - strand, within GFF7052 at 12.703 kb on - strand, within GFF7052 at 12.703 kb on - strand, within GFF7052 at 12.703 kb on - strand, within GFF7052 at 12.703 kb on - strand, within GFF7052 at 12.717 kb on + strand, within GFF7052 at 12.717 kb on + strand, within GFF7052 at 12.718 kb on - strand, within GFF7052 at 12.867 kb on + strand, within GFF7052 at 12.867 kb on + strand, within GFF7052 at 12.867 kb on + strand, within GFF7052 at 12.867 kb on + strand, within GFF7052 at 12.867 kb on + strand, within GFF7052 at 12.867 kb on + strand, within GFF7052 at 12.867 kb on + strand, within GFF7052 at 12.867 kb on + strand, within GFF7052 at 12.867 kb on + strand, within GFF7052 at 12.867 kb on + strand, within GFF7052 at 12.867 kb on + strand, within GFF7052 at 12.867 kb on + strand, within GFF7052 at 12.867 kb on + strand, within GFF7052 at 12.867 kb on + strand, within GFF7052 at 12.867 kb on + strand, within GFF7052 at 12.867 kb on + strand, within GFF7052 at 12.868 kb on - strand, within GFF7052 at 12.868 kb on - strand, within GFF7052 at 12.868 kb on - strand, within GFF7052 at 12.868 kb on - strand, within GFF7052 at 12.868 kb on - strand, within GFF7052 at 12.868 kb on - strand, within GFF7052 at 12.868 kb on - strand, within GFF7052 at 12.868 kb on - strand, within GFF7052 at 12.868 kb on - strand, within GFF7052 at 12.868 kb on - strand, within GFF7052 at 12.868 kb on - strand, within GFF7052 at 12.868 kb on - strand, within GFF7052 at 12.868 kb on - strand, within GFF7052 at 13.026 kb on + strand, within GFF7052 at 13.026 kb on + strand, within GFF7052 at 13.026 kb on + strand, within GFF7052 at 13.027 kb on - strand, within GFF7052 at 13.027 kb on - strand, within GFF7052 at 13.027 kb on - strand, within GFF7052 at 13.027 kb on - strand, within GFF7052 at 13.027 kb on - strand, within GFF7052 at 13.158 kb on + strand, within GFF7052 at 13.158 kb on + strand, within GFF7052 at 13.158 kb on + strand, within GFF7052 at 13.158 kb on + strand, within GFF7052 at 13.159 kb on - strand, within GFF7052 at 13.159 kb on - strand, within GFF7052 at 13.159 kb on - strand, within GFF7052 at 13.383 kb on + strand at 13.383 kb on + strand at 13.383 kb on + strand at 13.383 kb on + strand at 13.384 kb on - strand at 13.538 kb on + strand at 13.539 kb on - strand at 13.539 kb on - strand at 13.539 kb on - strand at 13.562 kb on + strand at 13.562 kb on + strand at 13.562 kb on + strand at 13.562 kb on + strand at 13.562 kb on + strand at 13.563 kb on - strand at 13.563 kb on - strand at 13.563 kb on - strand at 13.563 kb on - strand at 13.563 kb on - strand at 13.563 kb on - strand at 13.563 kb on - strand at 13.563 kb on - strand at 13.593 kb on - strand at 13.603 kb on + strand at 13.724 kb on - strand, within GFF7053 at 14.041 kb on + strand, within GFF7053 at 14.330 kb on - strand, within GFF7053 at 14.330 kb on - strand, within GFF7053 at 14.524 kb on + strand at 14.524 kb on + strand at 14.525 kb on - strand at 14.525 kb on - strand at 14.525 kb on - strand at 14.525 kb on - strand at 14.528 kb on + strand at 14.528 kb on + strand at 14.528 kb on + strand at 14.528 kb on + strand at 14.528 kb on + strand at 14.528 kb on + strand at 14.528 kb on + strand at 14.528 kb on + strand at 14.529 kb on - strand at 14.529 kb on - strand at 14.529 kb on - strand at 14.529 kb on - strand at 14.529 kb on - strand at 14.529 kb on - strand at 14.529 kb on - strand at 14.529 kb on - strand at 14.568 kb on - strand at 14.568 kb on - strand at 14.828 kb on + strand, within GFF7054 at 14.834 kb on + strand, within GFF7054 at 14.835 kb on - strand, within GFF7054 at 15.125 kb on + strand at 15.126 kb on - strand at 15.126 kb on - strand at 15.126 kb on - strand at 15.390 kb on - strand, within GFF7055
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL remove 12,690 + GFF7052 0.40 -0.6 12,691 - GFF7052 0.40 +0.2 12,691 - GFF7052 0.40 -1.1 12,691 - GFF7052 0.40 +0.3 12,691 - GFF7052 0.40 +0.5 12,691 - GFF7052 0.40 +0.4 12,702 + GFF7052 0.40 -0.1 12,702 + GFF7052 0.40 -2.2 12,702 + GFF7052 0.40 -0.5 12,702 + GFF7052 0.40 -0.6 12,703 - GFF7052 0.41 +1.2 12,703 - GFF7052 0.41 -1.4 12,703 - GFF7052 0.41 -0.4 12,703 - GFF7052 0.41 -0.4 12,703 - GFF7052 0.41 +0.3 12,717 + GFF7052 0.42 -0.2 12,717 + GFF7052 0.42 -0.6 12,718 - GFF7052 0.42 +0.4 12,867 + GFF7052 0.53 +1.0 12,867 + GFF7052 0.53 -0.2 12,867 + GFF7052 0.53 +0.2 12,867 + GFF7052 0.53 -0.9 12,867 + GFF7052 0.53 +0.6 12,867 + GFF7052 0.53 -1.0 12,867 + GFF7052 0.53 +0.5 12,867 + GFF7052 0.53 -0.2 12,867 + GFF7052 0.53 -0.9 12,867 + GFF7052 0.53 +0.4 12,867 + GFF7052 0.53 +2.1 12,867 + GFF7052 0.53 +0.3 12,867 + GFF7052 0.53 +0.2 12,867 + GFF7052 0.53 +0.4 12,867 + GFF7052 0.53 -0.8 12,867 + GFF7052 0.53 +0.1 12,868 - GFF7052 0.53 -0.4 12,868 - GFF7052 0.53 +0.5 12,868 - GFF7052 0.53 +0.3 12,868 - GFF7052 0.53 -0.8 12,868 - GFF7052 0.53 -0.7 12,868 - GFF7052 0.53 -0.1 12,868 - GFF7052 0.53 +0.7 12,868 - GFF7052 0.53 -0.9 12,868 - GFF7052 0.53 -0.0 12,868 - GFF7052 0.53 +1.4 12,868 - GFF7052 0.53 +0.8 12,868 - GFF7052 0.53 -1.1 12,868 - GFF7052 0.53 -0.2 13,026 + GFF7052 0.65 -2.1 13,026 + GFF7052 0.65 +0.5 13,026 + GFF7052 0.65 -1.1 13,027 - GFF7052 0.65 +0.4 13,027 - GFF7052 0.65 +0.1 13,027 - GFF7052 0.65 -0.2 13,027 - GFF7052 0.65 -0.3 13,027 - GFF7052 0.65 -0.3 13,158 + GFF7052 0.75 -0.9 13,158 + GFF7052 0.75 -0.2 13,158 + GFF7052 0.75 +0.0 13,158 + GFF7052 0.75 +0.8 13,159 - GFF7052 0.75 +0.8 13,159 - GFF7052 0.75 -0.4 13,159 - GFF7052 0.75 -1.7 13,383 + -0.6 13,383 + -0.4 13,383 + -2.4 13,383 + -1.5 13,384 - -0.4 13,538 + +0.2 13,539 - +0.5 13,539 - -0.1 13,539 - +0.1 13,562 + -0.6 13,562 + -0.7 13,562 + +0.3 13,562 + -0.3 13,562 + -1.2 13,563 - -0.2 13,563 - -1.8 13,563 - -0.2 13,563 - -1.3 13,563 - -0.6 13,563 - -0.4 13,563 - -0.5 13,563 - -0.7 13,593 - -0.3 13,603 + -0.9 13,724 - GFF7053 0.11 -0.8 14,041 + GFF7053 0.46 -1.4 14,330 - GFF7053 0.78 -0.6 14,330 - GFF7053 0.78 -0.3 14,524 + +0.1 14,524 + +0.3 14,525 - +1.4 14,525 - +0.0 14,525 - -1.4 14,525 - -0.5 14,528 + -0.0 14,528 + -0.0 14,528 + -0.3 14,528 + -0.7 14,528 + -0.8 14,528 + +0.5 14,528 + +1.3 14,528 + +1.3 14,529 - -0.0 14,529 - +0.7 14,529 - -0.6 14,529 - -0.1 14,529 - -0.6 14,529 - +0.7 14,529 - +0.5 14,529 - -0.6 14,568 - -0.0 14,568 - +0.8 14,828 + GFF7054 0.46 -2.3 14,834 + GFF7054 0.47 -0.3 14,835 - GFF7054 0.48 -0.0 15,125 + -0.1 15,126 - -0.4 15,126 - +0.5 15,126 - -0.9 15,390 - GFF7055 0.15 +1.1
Or see this region's nucleotide sequence