Strain Fitness in Variovorax sp. SCN45 around GFF67

Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
82,876	+		GFF66	0.33	+0.0
83,122	+		GFF66	0.53	-0.1
83,122	+		GFF66	0.53	-1.0
83,191	+		GFF66	0.59	+0.5
83,467	+		GFF66	0.81	-0.3
83,467	+		GFF66	0.81	-1.7
83,467	+		GFF66	0.81	-1.2
83,467	+		GFF66	0.81	+0.4
83,468	-		GFF66	0.81	+0.9
83,468	-		GFF66	0.81	-1.1
83,468	-		GFF66	0.81	+0.7
83,468	-		GFF66	0.81	-1.5
83,564	-		GFF66	0.88	-0.9
83,602	+				-0.4
83,602	+				-0.7
83,602	+				-2.2
83,603	-				-0.9
83,721	+				-0.2
83,721	+				+0.0
83,721	+				-0.4
83,722	-				+0.4
83,763	+				-0.3
83,764	-				-1.1
83,854	-		GFF67	0.12	+0.7
83,877	+		GFF67	0.14	+0.6
83,878	-		GFF67	0.14	-0.8
84,126	+		GFF67	0.34	-0.3
84,126	+		GFF67	0.34	-0.7
84,127	-		GFF67	0.34	+1.2
84,408	+		GFF67	0.57	-2.5
84,408	+		GFF67	0.57	-0.2
84,409	-		GFF67	0.57	+1.0
84,409	-		GFF67	0.57	-0.7
84,861	+				+1.0
85,052	-				-0.2
85,052	-				+0.7
85,052	-				+0.3
85,265	-		GFF68	0.26	+1.9
85,267	+		GFF68	0.27	-0.3
85,360	+		GFF68	0.35	+1.9
85,360	+		GFF68	0.35	-0.5
85,361	-		GFF68	0.35	-0.2
85,420	+		GFF68	0.40	-0.7
85,420	+		GFF68	0.40	+0.0
85,505	-		GFF68	0.48	-0.5
85,582	+		GFF68	0.55	-2.5
85,582	+		GFF68	0.55	-1.0
85,583	-		GFF68	0.55	+1.3
85,583	-		GFF68	0.55	+0.4
85,616	-		GFF68	0.58	-0.3
85,639	+		GFF68	0.60	-0.7
85,672	+		GFF68	0.63	-0.5
85,672	+		GFF68	0.63	-0.0
85,673	-		GFF68	0.63	-0.1
85,673	-		GFF68	0.63	-0.6