Strain Fitness in Variovorax sp. SCN45 around GFF6334

Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
120	+				-0.3
120	+				-0.6
135	-				-1.6
163	+				-1.2
241	+				-1.3
280	+		GFF6334	0.24	-0.8
281	-		GFF6334	0.25	-2.0
514	+				-0.3
514	+				-0.6
514	+				+0.7
702	+				-1.1
703	-				-0.3
1,063	+		GFF6335	0.39	-0.9
1,063	+		GFF6335	0.39	-0.6
1,063	+		GFF6335	0.39	-1.6
1,130	+		GFF6335	0.58	-0.9
1,130	+		GFF6335	0.58	-0.6
1,131	-		GFF6335	0.58	-0.2
1,131	-		GFF6335	0.58	+0.5