Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF6143 and GFF6144 are separated by 178 nucleotides GFF6144 and GFF6145 are separated by 155 nucleotides GFF6145 and GFF6146 are separated by 1 nucleotides
GFF6143 - 2-aminoethylphosphonate ABC transporter ATP-binding protein (TC 3.A.1.9.1), at 47,020 to 48,156
GFF6143
GFF6144 - 2-aminoethylphosphonate ABC transporter substrate-binding protein, at 48,335 to 49,375
GFF6144
GFF6145 - 2-aminoethylphosphonate utilization transcriptional regulator, GntR family, at 49,531 to 50,259
GFF6145
GFF6146 - Phosphonoacetate hydrolase (EC 3.11.1.2), at 50,261 to 51,487
GFF6146
Position (kb) 48
49
50 Strain fitness (log2 ratio) -2
-1
0
1 at 47.441 kb on + strand, within GFF6143 at 47.441 kb on + strand, within GFF6143 at 47.442 kb on - strand, within GFF6143 at 47.717 kb on + strand, within GFF6143 at 47.718 kb on - strand, within GFF6143 at 47.718 kb on - strand, within GFF6143 at 47.855 kb on + strand, within GFF6143 at 47.855 kb on + strand, within GFF6143 at 48.151 kb on - strand at 48.336 kb on + strand at 48.336 kb on + strand at 48.441 kb on + strand, within GFF6144 at 48.441 kb on + strand, within GFF6144 at 48.441 kb on + strand, within GFF6144 at 48.442 kb on - strand, within GFF6144 at 48.442 kb on - strand, within GFF6144 at 48.483 kb on + strand, within GFF6144 at 48.750 kb on + strand, within GFF6144 at 48.751 kb on - strand, within GFF6144 at 48.751 kb on - strand, within GFF6144 at 48.783 kb on + strand, within GFF6144 at 48.783 kb on + strand, within GFF6144 at 48.783 kb on + strand, within GFF6144 at 48.784 kb on - strand, within GFF6144 at 48.784 kb on - strand, within GFF6144 at 48.784 kb on - strand, within GFF6144 at 48.784 kb on - strand, within GFF6144 at 48.837 kb on + strand, within GFF6144 at 48.838 kb on - strand, within GFF6144 at 48.885 kb on + strand, within GFF6144 at 48.885 kb on + strand, within GFF6144 at 48.885 kb on + strand, within GFF6144 at 48.885 kb on + strand, within GFF6144 at 48.886 kb on - strand, within GFF6144 at 49.020 kb on + strand, within GFF6144 at 49.020 kb on + strand, within GFF6144 at 49.020 kb on + strand, within GFF6144 at 49.057 kb on - strand, within GFF6144 at 49.233 kb on + strand, within GFF6144 at 49.234 kb on - strand, within GFF6144 at 49.266 kb on + strand, within GFF6144 at 49.266 kb on + strand, within GFF6144 at 49.267 kb on - strand, within GFF6144 at 49.524 kb on - strand at 49.524 kb on - strand at 49.524 kb on - strand at 49.804 kb on + strand, within GFF6145 at 49.805 kb on - strand, within GFF6145 at 49.939 kb on + strand, within GFF6145 at 49.939 kb on + strand, within GFF6145 at 49.940 kb on - strand, within GFF6145 at 50.011 kb on + strand, within GFF6145 at 50.011 kb on + strand, within GFF6145 at 50.012 kb on - strand, within GFF6145 at 50.012 kb on - strand, within GFF6145
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL remove 47,441 + GFF6143 0.37 +0.2 47,441 + GFF6143 0.37 +1.5 47,442 - GFF6143 0.37 -0.3 47,717 + GFF6143 0.61 -0.2 47,718 - GFF6143 0.61 -0.2 47,718 - GFF6143 0.61 -0.4 47,855 + GFF6143 0.73 -0.7 47,855 + GFF6143 0.73 +1.0 48,151 - -0.4 48,336 + -0.6 48,336 + -0.5 48,441 + GFF6144 0.10 -2.7 48,441 + GFF6144 0.10 +0.2 48,441 + GFF6144 0.10 -0.1 48,442 - GFF6144 0.10 -0.1 48,442 - GFF6144 0.10 +0.2 48,483 + GFF6144 0.14 -0.1 48,750 + GFF6144 0.40 +1.5 48,751 - GFF6144 0.40 -0.2 48,751 - GFF6144 0.40 -0.1 48,783 + GFF6144 0.43 -0.1 48,783 + GFF6144 0.43 -1.1 48,783 + GFF6144 0.43 -0.4 48,784 - GFF6144 0.43 -1.8 48,784 - GFF6144 0.43 +0.0 48,784 - GFF6144 0.43 -0.8 48,784 - GFF6144 0.43 -0.1 48,837 + GFF6144 0.48 -0.6 48,838 - GFF6144 0.48 -1.3 48,885 + GFF6144 0.53 +0.8 48,885 + GFF6144 0.53 +0.3 48,885 + GFF6144 0.53 +0.3 48,885 + GFF6144 0.53 -0.7 48,886 - GFF6144 0.53 -0.2 49,020 + GFF6144 0.66 -0.3 49,020 + GFF6144 0.66 -0.7 49,020 + GFF6144 0.66 +0.5 49,057 - GFF6144 0.69 +0.1 49,233 + GFF6144 0.86 -0.2 49,234 - GFF6144 0.86 -0.5 49,266 + GFF6144 0.89 +0.5 49,266 + GFF6144 0.89 -0.3 49,267 - GFF6144 0.90 +0.9 49,524 - -1.5 49,524 - -0.1 49,524 - +0.8 49,804 + GFF6145 0.37 -1.4 49,805 - GFF6145 0.38 -2.2 49,939 + GFF6145 0.56 -0.5 49,939 + GFF6145 0.56 -1.1 49,940 - GFF6145 0.56 -0.9 50,011 + GFF6145 0.66 -0.2 50,011 + GFF6145 0.66 -0.3 50,012 - GFF6145 0.66 -0.5 50,012 - GFF6145 0.66 +0.2
Or see this region's nucleotide sequence