Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF4781 and GFF4782 overlap by 1 nucleotides GFF4782 and GFF4783 are separated by 108 nucleotides
GFF4781 - AttH component of AttEFGH ABC transport system, at 148,402 to 149,469
GFF4781
GFF4782 - Pyridoxal-5'-phosphate-dependent enzyme beta superfamily (fold type II), at 149,469 to 150,545
GFF4782
GFF4783 - Penicillin acylase (EC 3.5.1.11), at 150,654 to 153,146
GFF4783
Position (kb) 149
150
151 Strain fitness (log2 ratio) -2
-1
0
1 at 148.919 kb on + strand, within GFF4781 at 148.919 kb on + strand, within GFF4781 at 148.920 kb on - strand, within GFF4781 at 148.920 kb on - strand, within GFF4781 at 148.922 kb on + strand, within GFF4781 at 148.922 kb on + strand, within GFF4781 at 148.923 kb on - strand, within GFF4781 at 148.923 kb on - strand, within GFF4781 at 148.923 kb on - strand, within GFF4781 at 148.923 kb on - strand, within GFF4781 at 148.925 kb on + strand, within GFF4781 at 148.925 kb on + strand, within GFF4781 at 148.925 kb on + strand, within GFF4781 at 148.926 kb on - strand, within GFF4781 at 148.926 kb on - strand, within GFF4781 at 148.926 kb on - strand, within GFF4781 at 148.926 kb on - strand, within GFF4781 at 149.048 kb on + strand, within GFF4781 at 149.049 kb on - strand, within GFF4781 at 149.264 kb on + strand, within GFF4781 at 149.321 kb on + strand, within GFF4781 at 149.321 kb on + strand, within GFF4781 at 149.321 kb on + strand, within GFF4781 at 149.321 kb on + strand, within GFF4781 at 149.321 kb on + strand, within GFF4781 at 149.321 kb on + strand, within GFF4781 at 149.322 kb on - strand, within GFF4781 at 149.532 kb on + strand at 149.532 kb on + strand at 149.564 kb on - strand at 149.851 kb on + strand, within GFF4782 at 149.851 kb on + strand, within GFF4782 at 149.851 kb on + strand, within GFF4782 at 149.852 kb on - strand, within GFF4782 at 149.921 kb on - strand, within GFF4782 at 150.064 kb on + strand, within GFF4782 at 150.064 kb on + strand, within GFF4782 at 150.064 kb on + strand, within GFF4782 at 150.065 kb on - strand, within GFF4782 at 150.082 kb on + strand, within GFF4782 at 150.082 kb on + strand, within GFF4782 at 150.082 kb on + strand, within GFF4782 at 150.083 kb on - strand, within GFF4782 at 150.083 kb on - strand, within GFF4782 at 150.083 kb on - strand, within GFF4782 at 150.124 kb on + strand, within GFF4782 at 150.124 kb on + strand, within GFF4782 at 150.124 kb on + strand, within GFF4782 at 150.124 kb on + strand, within GFF4782 at 150.166 kb on + strand, within GFF4782 at 150.167 kb on - strand, within GFF4782 at 150.250 kb on + strand, within GFF4782 at 150.250 kb on + strand, within GFF4782 at 150.332 kb on - strand, within GFF4782 at 150.332 kb on - strand, within GFF4782 at 150.400 kb on + strand, within GFF4782 at 150.401 kb on - strand, within GFF4782 at 150.401 kb on - strand, within GFF4782 at 150.472 kb on + strand at 150.472 kb on + strand at 150.472 kb on + strand at 150.534 kb on + strand at 150.534 kb on + strand at 150.534 kb on + strand at 150.545 kb on + strand at 150.560 kb on - strand at 150.560 kb on - strand at 150.579 kb on + strand at 150.579 kb on + strand at 150.613 kb on + strand at 150.858 kb on + strand at 150.858 kb on + strand at 150.859 kb on - strand at 150.974 kb on - strand, within GFF4783 at 151.020 kb on + strand, within GFF4783 at 151.020 kb on + strand, within GFF4783 at 151.021 kb on - strand, within GFF4783 at 151.021 kb on - strand, within GFF4783 at 151.038 kb on + strand, within GFF4783 at 151.093 kb on - strand, within GFF4783 at 151.447 kb on + strand, within GFF4783 at 151.448 kb on - strand, within GFF4783
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL remove 148,919 + GFF4781 0.48 -1.2 148,919 + GFF4781 0.48 -0.3 148,920 - GFF4781 0.49 -0.5 148,920 - GFF4781 0.49 -0.6 148,922 + GFF4781 0.49 -1.8 148,922 + GFF4781 0.49 +1.0 148,923 - GFF4781 0.49 -0.7 148,923 - GFF4781 0.49 -1.0 148,923 - GFF4781 0.49 -0.3 148,923 - GFF4781 0.49 -0.8 148,925 + GFF4781 0.49 -0.9 148,925 + GFF4781 0.49 +0.1 148,925 + GFF4781 0.49 +0.2 148,926 - GFF4781 0.49 -0.1 148,926 - GFF4781 0.49 +0.3 148,926 - GFF4781 0.49 -0.5 148,926 - GFF4781 0.49 -0.2 149,048 + GFF4781 0.60 -0.3 149,049 - GFF4781 0.61 -0.8 149,264 + GFF4781 0.81 -0.2 149,321 + GFF4781 0.86 -0.4 149,321 + GFF4781 0.86 +0.9 149,321 + GFF4781 0.86 +0.8 149,321 + GFF4781 0.86 -0.2 149,321 + GFF4781 0.86 +0.7 149,321 + GFF4781 0.86 -0.3 149,322 - GFF4781 0.86 -1.2 149,532 + -0.6 149,532 + +0.0 149,564 - +0.4 149,851 + GFF4782 0.35 -1.1 149,851 + GFF4782 0.35 -1.3 149,851 + GFF4782 0.35 -2.3 149,852 - GFF4782 0.36 -1.6 149,921 - GFF4782 0.42 +0.4 150,064 + GFF4782 0.55 -0.4 150,064 + GFF4782 0.55 -0.4 150,064 + GFF4782 0.55 -1.1 150,065 - GFF4782 0.55 +0.3 150,082 + GFF4782 0.57 +0.0 150,082 + GFF4782 0.57 -1.0 150,082 + GFF4782 0.57 -1.2 150,083 - GFF4782 0.57 -1.1 150,083 - GFF4782 0.57 -1.2 150,083 - GFF4782 0.57 +0.0 150,124 + GFF4782 0.61 +0.2 150,124 + GFF4782 0.61 -2.0 150,124 + GFF4782 0.61 -0.9 150,124 + GFF4782 0.61 -0.2 150,166 + GFF4782 0.65 -0.3 150,167 - GFF4782 0.65 -0.1 150,250 + GFF4782 0.73 +0.4 150,250 + GFF4782 0.73 +1.4 150,332 - GFF4782 0.80 -0.9 150,332 - GFF4782 0.80 -0.8 150,400 + GFF4782 0.86 +0.4 150,401 - GFF4782 0.87 +0.6 150,401 - GFF4782 0.87 +0.0 150,472 + -1.5 150,472 + -1.5 150,472 + -0.2 150,534 + -0.8 150,534 + +0.4 150,534 + -0.4 150,545 + -0.8 150,560 - -0.5 150,560 - -2.0 150,579 + +0.0 150,579 + -0.2 150,613 + -1.0 150,858 + +1.6 150,858 + -0.6 150,859 - -1.5 150,974 - GFF4783 0.13 -0.1 151,020 + GFF4783 0.15 +0.0 151,020 + GFF4783 0.15 -1.0 151,021 - GFF4783 0.15 +0.4 151,021 - GFF4783 0.15 +0.4 151,038 + GFF4783 0.15 -0.6 151,093 - GFF4783 0.18 -1.6 151,447 + GFF4783 0.32 +0.5 151,448 - GFF4783 0.32 -0.1
Or see this region's nucleotide sequence