Strain Fitness in Variovorax sp. SCN45 around GFF4747

Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
114,455	+		GFF4746	0.86	-1.1
114,788	+				-1.1
114,789	-				+1.4
114,789	-				-0.4
115,030	+		GFF4747	0.15	-0.2
115,030	+		GFF4747	0.15	+1.6
115,447	+		GFF4747	0.57	+0.4
115,447	+		GFF4747	0.57	+1.4
115,447	+		GFF4747	0.57	-0.2
115,447	+		GFF4747	0.57	+0.1
115,459	+		GFF4747	0.58	-0.2
115,546	+		GFF4747	0.67	+0.5
115,837	+				-1.6
116,036	+		GFF4748	0.19	-1.2
116,204	+		GFF4748	0.41	+0.2
116,396	+		GFF4748	0.66	-1.9
116,396	+		GFF4748	0.66	-1.2
116,681	+				+0.3