Strain Fitness in Variovorax sp. SCN45 around GFF4707

Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
70,144	+				+0.5
70,144	+				+1.1
70,144	+				-2.5
70,144	+				-0.2
70,145	-				+0.4
70,145	-				-0.9
70,145	-				-1.1
70,145	-				+0.9
70,145	-				-0.6
70,145	-				-0.8
70,145	-				-0.4
70,145	-				-0.0
70,145	-				+0.3
70,163	-				-0.8
70,263	+				+0.2
70,263	+				+0.4
70,263	+				-0.4
70,264	-				-0.3
70,264	-				+0.1
70,264	-				+0.0
70,264	-				-0.2
70,264	-				-0.1
70,868	+		GFF4706	0.69	-0.6
70,868	+		GFF4706	0.69	-0.9
70,868	+		GFF4706	0.69	+0.4
70,868	+		GFF4706	0.69	-0.1
70,868	+		GFF4706	0.69	-2.2
70,869	-		GFF4706	0.69	-1.8
70,869	-		GFF4706	0.69	+0.2
70,869	-		GFF4706	0.69	+1.5
70,962	-		GFF4706	0.80	-0.6
71,309	-		GFF4707	0.17	-0.2
71,525	-		GFF4707	0.38	+0.6
71,596	+		GFF4707	0.45	+1.6
71,597	-		GFF4707	0.45	+0.2
71,845	+		GFF4707	0.70	+0.3
71,845	+		GFF4707	0.70	+0.9
71,845	+		GFF4707	0.70	-0.4
71,845	+		GFF4707	0.70	-0.0
71,845	+		GFF4707	0.70	-1.5
71,845	+		GFF4707	0.70	-0.4
71,845	+		GFF4707	0.70	-0.0
71,846	-		GFF4707	0.70	-2.0
71,846	-		GFF4707	0.70	-0.1
71,846	-		GFF4707	0.70	-1.0
71,846	-		GFF4707	0.70	-0.0
71,846	-		GFF4707	0.70	+0.4
72,053	-				-1.0
72,053	-				-0.5
72,053	-				+0.2
72,053	-				+0.9
72,142	+				-1.7
72,143	-				-1.0
72,143	-				-0.1
72,143	-				-0.2
72,143	-				-0.5
72,143	-				+0.4
72,333	+		GFF4708	0.23	-0.1