Strain Fitness in Variovorax sp. SCN45 around GFF4651

Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
6,505	+				-1.7
6,505	+				+0.5
6,505	+				-0.3
6,505	+				+0.3
6,505	+				-2.3
6,506	-				-1.0
6,506	-				-0.0
6,824	-		GFF4650	0.44	-0.2
6,865	+		GFF4650	0.51	-0.6
6,866	-		GFF4650	0.51	-0.0
6,866	-		GFF4650	0.51	-0.6
6,922	+		GFF4650	0.61	-1.6
6,922	+		GFF4650	0.61	-0.7
6,922	+		GFF4650	0.61	-1.5
6,922	+		GFF4650	0.61	-0.3
6,922	+		GFF4650	0.61	-0.3
6,923	-		GFF4650	0.61	-1.5
7,553	+		GFF4651	0.27	+0.2
7,553	+		GFF4651	0.27	+0.8
7,553	+		GFF4651	0.27	-0.0
7,554	-		GFF4651	0.27	-1.1
7,869	-		GFF4651	0.55	-1.0
7,869	-		GFF4651	0.55	-0.0
7,880	+		GFF4651	0.56	+0.4
7,881	-		GFF4651	0.56	-0.6
7,881	-		GFF4651	0.56	+0.3
8,169	-		GFF4651	0.81	+0.5
8,410	+				-0.4
9,128	+		GFF4653	0.16	-1.5
9,129	-		GFF4653	0.16	+0.3
9,161	+		GFF4653	0.18	-0.2
9,161	+		GFF4653	0.18	-0.3
9,162	-		GFF4653	0.18	+0.8
9,162	-		GFF4653	0.18	-0.6
9,162	-		GFF4653	0.18	-0.5
9,264	-		GFF4653	0.26	-1.2
9,294	-		GFF4653	0.29	-1.2