Strain Fitness in Variovorax sp. SCN45 around GFF4285

Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
204,603	+		GFF4284	0.56	-0.0
204,604	-		GFF4284	0.56	+0.8
204,660	+		GFF4284	0.59	-0.5
204,661	-		GFF4284	0.59	-1.7
204,681	+		GFF4284	0.61	+0.7
204,810	+		GFF4284	0.69	-0.3
204,810	+		GFF4284	0.69	-0.3
204,810	+		GFF4284	0.69	-0.1
204,811	-		GFF4284	0.69	+0.1
204,811	-		GFF4284	0.69	+1.7
204,811	-		GFF4284	0.69	-1.5
205,017	+		GFF4284	0.82	+0.9
205,017	+		GFF4284	0.82	-1.3
205,206	+				-0.4
205,294	+				-0.8
205,295	-				-1.3
205,811	+		GFF4285	0.54	-0.9
205,811	+		GFF4285	0.54	-2.3
205,812	-		GFF4285	0.54	-0.4
205,926	-		GFF4285	0.66	-1.8
206,364	+				+0.3
206,737	+		GFF4286	0.46	-0.3
206,833	+		GFF4286	0.56	+1.1