Strain Fitness in Variovorax sp. SCN45 around GFF4098

Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
308,061	+		GFF4096	0.76	+0.8
308,129	-		GFF4096	0.83	+0.4
308,129	-		GFF4096	0.83	+0.5
308,881	+				-0.0
308,882	-				+0.3
308,882	-				-0.7
309,048	-		GFF4098	0.58	+0.1
309,048	-		GFF4098	0.58	+0.2
309,048	-		GFF4098	0.58	-0.2
309,083	+		GFF4098	0.77	+0.6
309,084	-		GFF4098	0.77	+0.2
309,256	+				+0.7
309,308	-				-0.9
309,308	-				-0.7
309,492	+				+0.2
309,571	-		GFF4099	0.12	+1.6
309,587	+		GFF4099	0.14	+0.3
309,588	-		GFF4099	0.15	-1.0
309,796	+		GFF4099	0.46	+1.6
309,880	+		GFF4099	0.59	+1.2
309,922	-		GFF4099	0.65	-1.7
309,922	-		GFF4099	0.65	-0.1